Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00502 ATGACGTCACACTCTCACTACCAACCCGACCTAGACAACGACTCCGTCACCTCCTCCCCTCGCTCCGACCATTTCCACGATGCGCCGCCGCGCGTCCGCTTCATGTGCAGCTTTGGCGGCAAGATCCTCCCCCGCCCCCACGATAACCAGCTCCGCTACGTCGGCGGCGACACTCGAATCGTCGCCGTGCACCGCTCCATCTCCTTCTCTGCCCTCATTCTCAAACTCTCCAAACTCTCAGGCATGAGCAACATTACGGCGAAGTACCAGCTCCCGAACGAGGATCTGGACGCGTTGATCTCGGTGACGACGGACGAAGACGTGGAGAACATGATGGATGAGTACGACCGCGTCGCACAGAATCAGAACCCGCGATCGGCGCGGCTTCGGCTCTTCCTCTTTCCCGAAGGGGAAGACTCTCGAGCCAGCAGCATCAGCTCGCTCTTGAACGGCTCAGCCAAACGCGAGAACTGGTTCCTCGACGCGCTAAACGGCGGCGTTTCGGGTCTCGAGCGTGGCCGCTCTGAAGCCTCCTCCATGGTCTCGGAAGTACCCGATTACCTCTTCGGATTGGACAACTCTGACGAAACACACCAGCGCGACCCTCGACCCAAGGACCGACCCGTTCTCCAAGACAGCGTTTCCGTTTCGGATCCGGGTTCTCCCGCCCCGGTTGTTTCCTCCCCGTATTGTTCCACTTCTTCAGCGCCCTGCGTGCCTTCTCTCCCGAACCTTCCCCCAGTAAAAACTAAACTTTCAAACCCGGTTCCTGATTCGGATTCGAAGGAAAATCAAGTCGAACCTGAAACGGAAGCTCAACCGAACCTTAACCAAAACCCGTACCCGGGTAACCCTGTAGTTCACTACCCCCCAGAAGCTTCTTATCCCGCCCATTCAGTAAACCCGGTTCCTGTTTTCTACGTTTCCGGTCCGGTTCAACCGGGAACTGTACCGGTTCCTATGCAGCAGACTCCTTATCCCTACGTTCAACAACCATACCATGCAGTGATGCCGTCTCAGGTTCCCATCGGATACCATCATTTGGTTCCGAGTTCGGGTCAAGTATACGGTGCAGGCGTGAGGCACATGGCTCCAATGCAACCTTACAATCCTTCCGCCGCTGTGGTTCACGACGGGTTGAAACAGCATATGTATCATGCCGTTCAGAATTCCGGTCCGGTTCCGGTTCACCCGTTGATGCCAATGACTGGTGCGGATGAACCGCAGAGAGGTGGAGCGGAGTATGTGGTGGGTCGGGGCCCCAATTCGCTGAATAACTGA 1281 0.5683 MTSHSHYQPDLDNDSVTSSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVHRSISFSALILKLSKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNQNPRSARLRLFLFPEGEDSRASSISSLLNGSAKRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSDETHQRDPRPKDRPVLQDSVSVSDPGSPAPVVSSPYCSTSSAPCVPSLPNLPPVKTKLSNPVPDSDSKENQVEPETEAQPNLNQNPYPGNPVVHYPPEASYPAHSVNPVPVFYVSGPVQPGTVPVPMQQTPYPYVQQPYHAVMPSQVPIGYHHLVPSSGQVYGAGVRHMAPMQPYNPSAAVVHDGLKQHMYHAVQNSGPVPVHPLMPMTGADEPQRGGAEYVVGRGPNSLNN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00502 426 MobiDBLite consensus disorder prediction 189 281 - -
Spst3g00502 426 SMART PB1_new 46 136 IPR000270 GO:0005515
Spst3g00502 426 MobiDBLite consensus disorder prediction 214 239 - -
Spst3g00502 426 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Spst3g00502 426 MobiDBLite consensus disorder prediction 1 16 - -
Spst3g00502 426 Gene3D - 52 135 - -
Spst3g00502 426 CDD PB1_UP2 35 134 - -
Spst3g00502 426 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Spst3g00502 426 MobiDBLite consensus disorder prediction 1 28 - -
Spst3g00502 426 SUPERFAMILY CAD & PB1 domains 47 143 - -
Spst3g00502 426 PANTHER OS05G0427100 PROTEIN-RELATED 14 357 - -
Spst3g00502 426 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00502 Spst-Chr3 8464038 8465416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00502 26 171 MAP Kinase Kinase Kinase AT5G57610 45.946 6.98e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00502 - - gmx:100806717 723.391