Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00498 ATGGGAGGTTCCACTAACCTCCTTTCATTCTTCATTTTATGGTTAACCACTTCTTTCACCCTCTTCTCCTTCTCCACACTTTCAATCTCCACAGATACCTTAACAAAATCCCAATCCCTTCAAACCAACCAAACTCTCCTGTCCCCAAATGCAATTTTCGAGCTGGGTTTCTTTTCCTACGCCAATTCCACCTGGTACTTGGCCATATGGTACAAAGCCATCCACGACGCAGATAAAACAGTGGTGTGGGTTGCAAATCGAGACACCCCACTTCAAAATTCCATCGGCTTTCTCAAAATAGGCGATAATGGAAACCTCCTCATCGTAAACCAATCCCACCAACCCGTGTGGTCCTCCAATCACACCACACAAATAACCAACCCAGTTCTTCAGCTCTTGGATTCCGGGAACCTCATTCTTCGAGAAGCAAACGAGAATGACCCCACAAGGTTACTCTGGCAGAGCTTCGATTACCCGACAGATACCTTGTTACCCGGCATGAAACTAGGTTGGAACTTCGACACGGGCATGGAGAAACACATAACCTCGTGGAGGGTAACAAACCAAGACCCTTCAAGCGGGGATTTTTCCTTCAAGCTAGATTACAGTGGCCTCCCGGAAATATTCCTCTGGAACAAGGACCAGAGAATCTACCGAAGTGGACCTTGGAATGGCGAGAGATTCAGCGGGGTACCCGAGATGCAGCCCGTCACCGAATCCATCAAATTCACGTTCTTTGCGGATCAGCACCAAGTATACTACACATTCTCAATTGCCAACCACTCCTTGTTCTCCAGACTCTCTGTGACCTCCGTTGGGGAACTCCAACGCCTCACCTGGATACAAAGCACCCAGGTTTGGAACAAATTCTGGTACGCTCCGAAAGACCAATGCGACAACTACAAAGAGTGCGGTCCGTACGGGGTCTGTGACACGAACGCTTCACCGGTGTGTCAGTGTATGAGAGGGTTCCGCCCCAGGAACCAGCAGGCGTGGAATTTGCGAGATGGGTCTGATGGGTGTGTGAGGAGCACGGGATTGGCGTGTGGGAGTGACAGGTTTTTGCATATGCAGAACGTGAAGTTGCCCGAGACAACATCGGTGTTCGTGAACAGGAGCATGGGGCTTGTGGAGTGTGGGGATTTGTGCCAGAGGAATTGTTCGTGCACTGGTTATGCGAATATTGAGATTTCGAATGGAGGGAGTGGGTGCGTGATGTGGGTTGGGGAGCTCTTGGACGTGAGACGCTACCCTTCGGGAGGGCAAGATCTTTATGTCAGATTGGCGGCTTCTGATGTAGGGGTAGAAGGTGGTTCTGGCAAGACAAGTGACACATTAAAGGATGTAGGCATTATAGTTGGTGTTGCAGCTTTTATAATATTGGCATTGGGCATCTTTATCTTGTGGAAGAAGAAGAAGAAGAAGAAGAAATTTCAACGTATATTAAAAGGGAAGTCAGAAAAAAGAGGTTTTTCGGAAAGGAGTCAGGATTTGTTAATGAATGAGGGAGTGTTTTCGAGTAACAGAGAACAGTCGGGTGAAAGTAACATGGACGACCTAGAGTTGCCATTGTTTGATTTTAACACCATAACAATGGCTACAAACAACTTCTCCGAAGAAAATAAACTTGGACAAGGAGGCTTCGGTAGTGTTTACAAAGGCTGGTTGAAGGAAGGTCAGCACATTGCTGTGAAGAGATTATCAAAAACTTCTGGCCAAGGAATTGAGGAGTTCAAGAATGAGGTCAAGTTAATTGTCAAGCTTCAACATCGAAATCTAGTTCGTTTGCTTGGTTGTAGCATTCAGATGGATGAGAAGATGCTGGTCTATGAATACATGGAAAACAGAAGCCTTGATGCCATTCTGTTTGATAAGACAAAAAAATCCTCACTGGACTGGCAAATGCGCTTCAACATTATATGTGGAATAGCTAGAGGACTTCTATATTTGCACCAAGATTCCAGATTTAGGATAATTCATAGGGATCTCAAGGCAAGCAACATTCTACTTGACAAAGAGATGAACCCAAAGATATCAGACTTTGGGATGGCTAGAACTTTTGGCACGGATCAGACAGAAGCAAATACCACGAGAGTTGTTGGAACATA 2108 0.4602 MGGSTNLLSFFILWLTTSFTLFSFSTLSISTDTLTKSQSLQTNQTLLSPNAIFELGFFSYANSTWYLAIWYKAIHDADKTVVWVANRDTPLQNSIGFLKIGDNGNLLIVNQSHQPVWSSNHTTQITNPVLQLLDSGNLILREANENDPTRLLWQSFDYPTDTLLPGMKLGWNFDTGMEKHITSWRVTNQDPSSGDFSFKLDYSGLPEIFLWNKDQRIYRSGPWNGERFSGVPEMQPVTESIKFTFFADQHQVYYTFSIANHSLFSRLSVTSVGELQRLTWIQSTQVWNKFWYAPKDQCDNYKECGPYGVCDTNASPVCQCMRGFRPRNQQAWNLRDGSDGCVRSTGLACGSDRFLHMQNVKLPETTSVFVNRSMGLVECGDLCQRNCSCTGYANIEISNGGSGCVMWVGELLDVRRYPSGGQDLYVRLAASDVGVEGGSGKTSDTLKDVGIIVGVAAFIILALGIFILWKKKKKKKKFQRILKGKSEKRGFSERSQDLLMNEGVFSSNREQSGESNMDDLELPLFDFNTITMATNNFSEENKLGQGGFGSVYKGWLKEGQHIAVKRLSKTSGQGIEEFKNEVKLIVKLQHRNLVRLLGCSIQMDEKMLVYEYMENRSLDAILFDKTKKSSLDWQMRFNIICGIARGLLYLHQDSRFRIIHRDLKASNILLDKEMNPKISDFGMARTFGTDQTEANTTRVVGT 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00498 702 Pfam Receptor serine/threonine kinase 493 527 IPR022126 GO:0004674
Spst3g00498 702 ProSiteProfiles PAN/Apple domain profile. 349 429 IPR003609 -
Spst3g00498 702 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 613 702 - -
Spst3g00498 702 SMART ntp_6 349 428 IPR003609 -
Spst3g00498 702 Pfam PAN-like domain 349 414 IPR003609 -
Spst3g00498 702 Gene3D Phosphorylase Kinase; domain 1 511 612 - -
Spst3g00498 702 PIRSF SRK 4 702 IPR024171 GO:0004674
Spst3g00498 702 Pfam S-locus glycoprotein domain 218 327 IPR000858 GO:0048544
Spst3g00498 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Spst3g00498 702 SMART blect_4 37 159 IPR001480 -
Spst3g00498 702 ProSitePatterns Protein kinases ATP-binding region signature. 543 565 IPR017441 GO:0005524
Spst3g00498 702 ProSiteProfiles Protein kinase domain profile. 537 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00498 702 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 696 - -
Spst3g00498 702 Pfam Protein kinase domain 538 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00498 702 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 225 IPR036426 -
Spst3g00498 702 Gene3D Transferase(Phosphotransferase) domain 1 613 702 - -
Spst3g00498 702 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Spst3g00498 702 ProSiteProfiles Bulb-type lectin domain profile. 31 153 IPR001480 -
Spst3g00498 702 Pfam D-mannose binding lectin 80 185 IPR001480 -
Spst3g00498 702 Gene3D - 25 156 IPR036426 -
Spst3g00498 702 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 503 612 - -
Spst3g00498 702 CDD B_lectin 37 159 IPR001480 -
Spst3g00498 702 SMART serkin_6 537 700 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00498 702 CDD PAN_AP_plant 347 429 - -
Spst3g00498 702 SUPERFAMILY Protein kinase-like (PK-like) 516 702 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00498 Spst-Chr3 8404451 8410375 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00498 515 702 Receptor kinase-like Gene Family AT4G23140 65.426 3.53e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g00498 Pkinase 9.9e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00498 - - gmx:106799702 1194.1