Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00496 ATGCACTCAGCTGAAAGTCTTCCAAGCTTTGTCATGTGCCAATACCATGAATGTAACGTCTACCTGCTATGCTCTTTGATTCTACTCCTCAGCTTCTCATTTTGCTCTTGTTCTGATACCATATTTGGTGACAAAGGCATCAGAGATGGAGAGCTTCTTGTTTCTAAATCCCAAACATTTGCTCTTGGATTCTTCACTCCAGGCAAGTCCAACTTCCGTTATGTGGGAATATGGTACAACAATGTGCAAGAACAAACTGTTGCTTGGGTTGCAAACAGAAACACTCCCATGAATGACACTTCTGGGGTTCTCTCAATCAACCCAGATGGAAACCTAGTACTCCAACACAAATATAGCACCGTTCCCGTTTGGTCGACCAACATTTCAACCACCCAATTAAACAGCACCGAAGTCATGGCTAAACTCACAGACATAGGTAACCTTGTTCTGATTCTAAACAACACCAAAACTGTCGTCTGGCAGAGCTTTGACCATCCCACGGATACCTTGCTTCCAGATCTAAGAGTTGGTTTTGACAGAAGAACAAACCAGAGTTGGTTCCTCCAATCCTGGAAGACAGATGATGACCCGGGAACAGGTTCTTACACCTTGAAAATAAGTAGCAGTGGACAACCACAGATGGTCTTTTACAACAAGAACCTTCCCTTTTGGCGAGGCGGATCGTGGAACGGTGAATTGTTTATGGGTGTACCCGACATGAAGAGAGATATGTATACTTTTAACGTTTCTTTTATAGAAGATGACAACCACGTACTACTATCATATAACATGGTTGATAAGTCCTTGATCTCTAGGGTAGTAGTTCAACCATCTGGTTTCTTTCAAGTATTCACCTGGGATAACCAAAATAGTCAATGGAATAGGTACTGGTCTGAACCAACAAATCAATGTGATAACTATGGAACCTGTGGATCAAACGGTAATTGTGACCCTTTAAACTTTGAGGAATTTCGGTGTACTTGTCTGCCTGGGTTTGAACCCAAATACCCAGATGATTGGTATAAAAACAGAGATGGGTCCGGAGGGTGCGTGAGGAAGCATCGTGCATCCATTTGTGGCGATGGGGAAGGGTTTGTCAAACTTGAAGGCTTGAAGCTTCCTGATACCTCTGAGGCAACTGCCATAAAGGGTTGGAGTTTGGATGAATGTCAGGGGGATTGCTTGAGAAATTGCTCTTGCACTGCATATGCCGTTCTTGATGTGAGGAATGGTGGAAGTGGGTGCTTGGCATGGCATGGGAATTTAGTAGACATACAAAAACTGAGTGATCAAGGCCAAGATTTATTTGTCCGTGTTGATGCAGTTGAACTAGCAAATTATAACAAGAAAACAAAAGGGGTACTCGGCAAAAAGAGGATGGTTGCAATTCTGATTGCTTCAGCACTTACAAGTGTCATTCTTTTCTCCTGTGTGTATTACCTGTGGAAGAGGAAAAGCAAAGATAAACTGATGCAACATTTAAAATTTTCCCCTGGAGACGACAACGATATCCAAAGCAACACACATCCAAATCTTCCCTTTTTCAGCCTTAAAGTGATAATGGAAGCCACAAGAAATTTTGGTGATGAAAATAAGCTTGGGCAAGGTGGATTTGGTTCTGTCTATAAGGGATGTCTAGTCAATGGACAAGAGATAGCAGTGAAAAGATTGTCCGAACATTCAGGTCAAGGGACAGAAGAATTTAAAACTGAAGTTACATTGTTAGTTAAACTTCAACACAGAAATCTGGTGAGGCTTCTCGGTTGTTGCTTTGAAAAAGAAGAAAGGATTGCTGGCAAGCAAGATTTTTCCACCACTCCAGCACCAAAGCTTTGCACAGAACAGTTCATAGATCCCCTGACTAAACCCACTGGAACAAATCAAAGAAAATTTTATACTCCCGTGTGGATACTTTGGACAGAAGGAAAAGCCTTGGAATTAGTTGATTCAACACTGCGTCAGTCTTATCCTCCTGCTCTTGTTCTGAGGTGCATTCAAATTGGTCTATTGTGCGTGCAAGAAAATGCAATGAATAGACCTTCCTTGTCAGAAGTTGTTTTCATGCTAGGCAATGAAACACCTCTCTCTCCACCCCAAAAGCCAGCATTTTTATTCAATAGAGACAAAGATTTGCCTGAGTCATCAACATCAGGTGGAGGATCTTCAATAAATGAAGTAACAGCAACTACCATCAGCGCTCGCTAG 2205 0.4209 MHSAESLPSFVMCQYHECNVYLLCSLILLLSFSFCSCSDTIFGDKGIRDGELLVSKSQTFALGFFTPGKSNFRYVGIWYNNVQEQTVAWVANRNTPMNDTSGVLSINPDGNLVLQHKYSTVPVWSTNISTTQLNSTEVMAKLTDIGNLVLILNNTKTVVWQSFDHPTDTLLPDLRVGFDRRTNQSWFLQSWKTDDDPGTGSYTLKISSSGQPQMVFYNKNLPFWRGGSWNGELFMGVPDMKRDMYTFNVSFIEDDNHVLLSYNMVDKSLISRVVVQPSGFFQVFTWDNQNSQWNRYWSEPTNQCDNYGTCGSNGNCDPLNFEEFRCTCLPGFEPKYPDDWYKNRDGSGGCVRKHRASICGDGEGFVKLEGLKLPDTSEATAIKGWSLDECQGDCLRNCSCTAYAVLDVRNGGSGCLAWHGNLVDIQKLSDQGQDLFVRVDAVELANYNKKTKGVLGKKRMVAILIASALTSVILFSCVYYLWKRKSKDKLMQHLKFSPGDDNDIQSNTHPNLPFFSLKVIMEATRNFGDENKLGQGGFGSVYKGCLVNGQEIAVKRLSEHSGQGTEEFKTEVTLLVKLQHRNLVRLLGCCFEKEERIAGKQDFSTTPAPKLCTEQFIDPLTKPTGTNQRKFYTPVWILWTEGKALELVDSTLRQSYPPALVLRCIQIGLLCVQENAMNRPSLSEVVFMLGNETPLSPPQKPAFLFNRDKDLPESSTSGGGSSINEVTATTISAR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00496 734 SMART ntp_6 360 439 IPR003609 -
Spst3g00496 734 Gene3D Phosphorylase Kinase; domain 1 501 598 - -
Spst3g00496 734 ProSiteProfiles PAN/Apple domain profile. 359 440 IPR003609 -
Spst3g00496 734 ProSiteProfiles EGF-like domain profile. 300 338 IPR000742 -
Spst3g00496 734 FunFam Os08g0179000 protein 501 601 - -
Spst3g00496 734 Gene3D - 34 164 IPR036426 -
Spst3g00496 734 ProSiteProfiles Protein kinase domain profile. 527 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00496 734 PIRSF SRK 615 734 IPR024171 GO:0004674
Spst3g00496 734 PIRSF SRK 11 598 IPR024171 GO:0004674
Spst3g00496 734 Gene3D Hepatocyte Growth Factor 357 437 - -
Spst3g00496 734 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Spst3g00496 734 SMART blect_4 44 166 IPR001480 -
Spst3g00496 734 MobiDBLite consensus disorder prediction 705 734 - -
Spst3g00496 734 CDD EGF_CA 302 336 - -
Spst3g00496 734 MobiDBLite consensus disorder prediction 710 734 - -
Spst3g00496 734 CDD PAN_AP_plant 360 439 - -
Spst3g00496 734 SUPERFAMILY Protein kinase-like (PK-like) 504 594 IPR011009 -
Spst3g00496 734 Pfam S-locus glycoprotein domain 224 335 IPR000858 GO:0048544
Spst3g00496 734 Pfam PAN-like domain 359 425 IPR003609 -
Spst3g00496 734 ProSiteProfiles Bulb-type lectin domain profile. 38 163 IPR001480 -
Spst3g00496 734 Gene3D Transferase(Phosphotransferase) domain 1 614 701 - -
Spst3g00496 734 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 33 163 - -
Spst3g00496 734 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 24 681 - -
Spst3g00496 734 SUPERFAMILY alpha-D-mannose-specific plant lectins 87 197 IPR036426 -
Spst3g00496 734 CDD B_lectin 47 166 IPR001480 -
Spst3g00496 734 Pfam D-mannose binding lectin 86 192 IPR001480 -
Spst3g00496 734 Pfam Protein tyrosine and serine/threonine kinase 531 595 IPR001245 GO:0004672|GO:0006468
Spst3g00496 734 SMART tyrkin_6 527 689 IPR020635 GO:0004713|GO:0006468
Spst3g00496 734 SUPERFAMILY Protein kinase-like (PK-like) 615 710 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00496 Spst-Chr3 8396027 8400053 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00496 444 597 Receptor kinase-like Gene Family AT4G04500 47.097 3.58e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g00496 S_locus_glycop 4.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00496 - - pvu:PHAVU_002G2200000 875.93