Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00495 ATGATCATTAAGCTGCTTTCAGCTAAAGAGTTTCTCAGTCCATTTCTTCTGCTGACGCTTCTCTACACTTGTTGCCATTCACTGGACAACACCATAACCACAAACCACCCCATCAAAGATGGCGACGTTTTGGTCTCCGACGGGTTAGGAAACTTTGCACTCGGTTTTTTCAGCCCGCGAAACTCCACCAGCCGATACGTTGGGATATGGTACAACAAAATCTCGGAACAAACGGTTGTGTGGGTTGCCAACAGAGACACTCCTCTTAACGACACTTCCGGTGTTCTCTCTATCAACAACCACGGAAACATCGTACTCCACGATAATAAAACCCGAAACCTCAACCCCGTTTGGTCTTCAAACGCTTCCGTCGCATCAACGAACGTTTTGGCCAAGCTTTTGGACACGGGAAACCTAGTTTTGGTTCAAACCGACATAAATATAGCTCGCTGGCAGAGTTTTGATCATCCTAGTAATACTTTGCTTCCATTCATGAAACTCGGGTTGGACCGCAAAACCGGTCTGGACCGGTTCTTAACATCGTGGAAATCAGGAAACGACCCTGGAACCGGGAACGTGACGTATAAAATCGACCCAACCGGGTTTCCGCAACTGTTTCTGTACAAAGGTGATGCTCCGTTGTGGAGGGTCGGGTCGTGGACGGGTCAGAGATGGAGCGGGGTGCCCGAGATGACTCCGAATTTTATTTTCAACGTTAGTTACGTGAACGACGAGAACGAGGTTTCGATAGTGTACGGAGTGAAGGACCCGACAGTGTTCTCGAGAATGGTGTTGGAGGAGGCGGGGCACGTGACGAGGTCCACGTGGCAGGGTCACGAGCGCAAGTGGTTTTCGATATGGGACGCGCCAAAGGAGGAGTGCGATAACTTCAGGCGGTGCGGGTCGAACGCGAACTGCGACCCGTATCACGCTGATAAGTTCGAGTGCGAGTGTTTGCCCGGGTTCGAACCCAGGTCCGAGAGGGAGTGGTTTCTTCGAGACGGGTCGGGTGGGTGCGTGCGGAAGAGAAATGTGTCGACGTGTGGAAGCGGAGAGGGGTTCGTGGAGGTGGAACGTGTGAAGGTTCCGGACACGTCGAAGGCGCGTGTGGTGGCGATGATTGGGATTAGAGAGTGCAGGGAGAGATGCTTGAAGGATTGCACGTGTGCGGCGTACACTAGTGCGAACGAGAGCTCGGAGAGTGGATGTGTTACTTGGCACGGTGACATGGAGGACACGAGGACGTACACGCAACTAGGACAAAATTTGTTCGTGCGAGTGGATGCTCTTGAATTAGCTAAATATGCAAAACATCCTCACGGTTCTCTTGGAATGAAGTGGATGGTGGCAATTTTAATCGCTGCTGTTTTCATGTTATTGTTTTTGGTAGTCACTTTCGTGAATTGGTTTGTTAAAGCCAGGAAAAGAGGCTTAAAAAGGAATCGCAAGTATTCCTTTCGTCTTAGCTTGGAGGACTCTACTGATCTACAAGAATTTAGCATTAAAAAGAATTCAGATTTACCGTTCTTTGATCTTAGCTCCATAGCTGCTGCCACAGACAATTTTTCTGATTCTAACAAGCTTGGCCAAGGAGGTTTTGGTTCTGTTTATAAGGGTCTACTGAGTAATGGAATGGAAATAGCAGTGAAGAGACTGTCAAAGTACTCTGGACAAGGCATAGAAGAGTTTAAAAATGAGGTGGTTTTGATCTCAAAGCTCCAACACAGAAATCTGGTGAGGATCTTAGGTTGCTGCATTCAAGGAGAGGAGAAGATGTTAATCTATGAGTATTTGCCTAATAAGAGTTTGGACTCTTTAATTTTTGATGAATTGAAAAGGTCACAACTAGACTGGAAAAAGCGATTTGATATCATCTGTGGGATTGCTAGAGGAATCTTATACCTTCATCAAGATTCACGATTGAGAATCATTCATAGAGACCTAAAAGCCAGCAACGTCTTGCTGGACTCTGTACTGAACCCCAAAATTGCAGATTTTGGTATGGCTCGAATATTTGCTGGAAACCAAATTGAAGCAAACACAAATCGTGTTGTTGGAACCTATGGCTATATGTCACCAGAATATGCCATGGAAGGACAATTTTCAATAAAGTCTGATGTATACAGCTTCGGAGTTTTACTTCTAGAGATCATTACAGGCAGAAAGAATAGTGGTCAATATGAAGATATTACAGCCACAAATTTAGTTGGACATATATGGGATCTATGGAGAGAAGGGAGAACCATGGAGATTGTTGATCAATCATTGGGAGAGTCGTGCTGTGACCTTGAAGTCCAAAGATGCATCCAAATTGGTCTTTTATGCGTGCAAGATTATGCCGCTGACAGACCATCTATGTCAGCTGTTGTTTTCATGCTGGGTAATGACTCGACTATTCCTGCTCCAAAACAACCCGCATTTATTTTCAAGAAAACTAATTGTGAGAGTTCAAATCCATCAACCAGTGAAGGAATTTATTCAGTAAATGATGTAAGTATAACCATGATTGAAGCGCGCTGA 2520 0.456 MIIKLLSAKEFLSPFLLLTLLYTCCHSLDNTITTNHPIKDGDVLVSDGLGNFALGFFSPRNSTSRYVGIWYNKISEQTVVWVANRDTPLNDTSGVLSINNHGNIVLHDNKTRNLNPVWSSNASVASTNVLAKLLDTGNLVLVQTDINIARWQSFDHPSNTLLPFMKLGLDRKTGLDRFLTSWKSGNDPGTGNVTYKIDPTGFPQLFLYKGDAPLWRVGSWTGQRWSGVPEMTPNFIFNVSYVNDENEVSIVYGVKDPTVFSRMVLEEAGHVTRSTWQGHERKWFSIWDAPKEECDNFRRCGSNANCDPYHADKFECECLPGFEPRSEREWFLRDGSGGCVRKRNVSTCGSGEGFVEVERVKVPDTSKARVVAMIGIRECRERCLKDCTCAAYTSANESSESGCVTWHGDMEDTRTYTQLGQNLFVRVDALELAKYAKHPHGSLGMKWMVAILIAAVFMLLFLVVTFVNWFVKARKRGLKRNRKYSFRLSLEDSTDLQEFSIKKNSDLPFFDLSSIAAATDNFSDSNKLGQGGFGSVYKGLLSNGMEIAVKRLSKYSGQGIEEFKNEVVLISKLQHRNLVRILGCCIQGEEKMLIYEYLPNKSLDSLIFDELKRSQLDWKKRFDIICGIARGILYLHQDSRLRIIHRDLKASNVLLDSVLNPKIADFGMARIFAGNQIEANTNRVVGTYGYMSPEYAMEGQFSIKSDVYSFGVLLLEIITGRKNSGQYEDITATNLVGHIWDLWREGRTMEIVDQSLGESCCDLEVQRCIQIGLLCVQDYAADRPSMSAVVFMLGNDSTIPAPKQPAFIFKKTNCESSNPSTSEGIYSVNDVSITMIEAR 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00495 839 ProSitePatterns Serine/Threonine protein kinases active-site signature. 643 655 IPR008271 GO:0004672|GO:0006468
Spst3g00495 839 SMART serkin_6 522 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00495 839 Pfam Protein tyrosine and serine/threonine kinase 525 790 IPR001245 GO:0004672|GO:0006468
Spst3g00495 839 Gene3D - 23 155 IPR036426 -
Spst3g00495 839 CDD PAN_AP_plant 346 427 - -
Spst3g00495 839 CDD B_lectin 35 157 IPR001480 -
Spst3g00495 839 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 16 785 - -
Spst3g00495 839 Pfam S-locus glycoprotein domain 215 325 IPR000858 GO:0048544
Spst3g00495 839 ProSitePatterns Protein kinases ATP-binding region signature. 528 550 IPR017441 GO:0005524
Spst3g00495 839 Pfam Domain of unknown function (DUF3403) 795 839 IPR021820 GO:0004674
Spst3g00495 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 488 597 - -
Spst3g00495 839 Gene3D Transferase(Phosphotransferase) domain 1 598 802 - -
Spst3g00495 839 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Spst3g00495 839 Pfam PAN-like domain 348 412 IPR003609 -
Spst3g00495 839 SUPERFAMILY Protein kinase-like (PK-like) 505 793 IPR011009 -
Spst3g00495 839 CDD STKc_IRAK 528 793 - -
Spst3g00495 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 154 - -
Spst3g00495 839 SMART blect_4 35 157 IPR001480 -
Spst3g00495 839 CDD EGF_CA 293 326 - -
Spst3g00495 839 ProSiteProfiles EGF-like domain profile. 290 327 IPR000742 -
Spst3g00495 839 ProSiteProfiles PAN/Apple domain profile. 348 428 IPR003609 -
Spst3g00495 839 PIRSF SRK 2 839 IPR024171 GO:0004674
Spst3g00495 839 Pfam D-mannose binding lectin 78 183 IPR001480 -
Spst3g00495 839 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 598 801 - -
Spst3g00495 839 ProSiteProfiles Protein kinase domain profile. 522 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00495 839 Gene3D Phosphorylase Kinase; domain 1 484 597 - -
Spst3g00495 839 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 188 IPR036426 -
Spst3g00495 839 SMART ntp_6 349 427 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00495 Spst-Chr3 8391754 8395419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00495 482 839 Receptor kinase-like Gene Family AT4G11530 57.808 3.42e-134 413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g00495 PK_Tyr_Ser-Thr 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00495 - - gmx:100812814 1473.76