Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst3g00480 | GATATGCAAAGGGCTACTTCTAATTTCACCACCATCATTGGCAACGGAGCCTTTGGTTCTGTTTATAAAGCACAGATGGCTACAGGTGAGACAGTTGCAGTTAAAGTCCTAGGTACTAATTCAAGACAAGGAGAGCAGGAATTTTTATCTGAGGTTTTATTACTCGGAAGATTACATCACAGAAACCTGGTTGATTTGGTGGGATATGTGGCAGAAAGAGGACGACATATGCTTCTTTACACTTACATGAGCAATGGCAGTCTTGCTTCCCATTTGTATGATTTCGGGAAAAATCATGAGCCATTGAGTTGGGATTTGAGGCTTGGCATAGCACTGGATGTTGCAAGGGGACTGGAATATCTACATTGTGGGGCTTCTCCACCTGTTGTGCACCGTGACATCAAATCTTGCAACATACTGCTGGATCAGTCTATGAAGGCCAAGGTCACTGACTTTGGGCTTTCCAGACCAGAGATGATCAAACCTCGCACATCGAAGATCCGAGGAACTTTCGGCTATCTTGACCCTGAGTACTTGTCTACAAGAACCTTCACTAAGAAAAGTGATGTTTATAGCTTTGGTGTGCTACTGTTTGAGCTTATCACAGGCAGGAATCCGCAGCTAGGGCTCATGGAATATGTAAAACTAGCAGCCATGGAAGGTGAGGATAAGGTTGGATGGGAAGAAATTGTGGACGGACAATTAAATGGAAAATATGATGTGCATACTCTTAACGACATTGCTTCACTTGCTTTCAAATGTGTCAATGAAGTCTCCGAAAGACGACCCTCGATGTGTGAAAATTTTCAAGAATTATCTCAGCTTTCTAAGAGGCATAGTAAAATTAATGGCCCAACATCATCTGCTGCTGCATTAAAGGAAATGTGCATTGGAATCGACCAGACTGAAACTCAGGGCTTTTCATCAATTGAGCGCACAAACTTATTGGGGAGATTGCATAGCCGATGA | 969 | 0.4293 | DMQRATSNFTTIIGNGAFGSVYKAQMATGETVAVKVLGTNSRQGEQEFLSEVLLLGRLHHRNLVDLVGYVAERGRHMLLYTYMSNGSLASHLYDFGKNHEPLSWDLRLGIALDVARGLEYLHCGASPPVVHRDIKSCNILLDQSMKAKVTDFGLSRPEMIKPRTSKIRGTFGYLDPEYLSTRTFTKKSDVYSFGVLLFELITGRNPQLGLMEYVKLAAMEGEDKVGWEEIVDGQLNGKYDVHTLNDIASLAFKCVNEVSERRPSMCENFQELSQLSKRHSKINGPTSSAAALKEMCIGIDQTETQGFSSIERTNLLGRLHSR | 322 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst3g00480 | 322 | CDD | STKc_IRAK | 13 | 275 | - | - | |
Spst3g00480 | 322 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 82 | - | - | |
Spst3g00480 | 322 | PANTHER | OS01G0750732 PROTEIN | 1 | 287 | - | - | |
Spst3g00480 | 322 | FunFam | calcium/calmodulin-regulated receptor-like kinase 1 | 83 | 292 | - | - | |
Spst3g00480 | 322 | SUPERFAMILY | Protein kinase-like (PK-like) | 5 | 267 | IPR011009 | - | |
Spst3g00480 | 322 | Pfam | Protein tyrosine and serine/threonine kinase | 9 | 267 | IPR001245 | GO:0004672|GO:0006468 | |
Spst3g00480 | 322 | PIRSF | ILK | 2 | 285 | - | - | |
Spst3g00480 | 322 | ProSitePatterns | Protein kinases ATP-binding region signature. | 13 | 35 | IPR017441 | GO:0005524 | |
Spst3g00480 | 322 | SMART | serkin_6 | 7 | 275 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst3g00480 | 322 | ProSiteProfiles | Protein kinase domain profile. | 7 | 282 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst3g00480 | 322 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 | |
Spst3g00480 | 322 | Gene3D | Transferase(Phosphotransferase) domain 1 | 83 | 293 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst3g00480 | Spst-Chr3 | 8022916 | 8025817 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst3g00480 | 2 | 267 | Receptor kinase-like Gene Family | AT1G67720 | 44.565 | 1.55e-71 | 236 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-2 | Spst3g00480 | PK_Tyr_Ser-Thr | 3.9e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst3g00480 | - | - | gmx:100816549 | 529.635 |