Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00442 ATGATATCAATCATTAATCGCTTTAACAAGCACAAGGAGGACCATATATGGCTAAGGGATCCTGCTTCATCTGTGCAGAGAGAAGCGGAATGCTTAAGCCAAAAACTACAACACTTGCAAGAAAGCTACAGGCAACTAATGGGTGAAGAACTTTCTGGTTTGGATACCAATCAGCTAAAGAATCTGGAAAGTCAAATGCAAATTGGTTTGAATAGCGTTCGAATGCAAAAGGATCAAATGTTTACAGATGAGATCGAAGAATTGCAAGAAAAGGGAAGCTTCATTCATCTAAAAAATGAAGAACTTCATACGAAGATAGACCTTATCCACGAACAAAATGCAGAACTACAGAAGGGATACGGAAAAAGAAAAGGCAACACTATCCTCCACATGTTATCAGCAATGGATATGATGATATCACTCTTCAACAAAGCCAGCAATGATATGGGGTATTCCCTCACCCTCAAATTGATGAAAAATTAA 483 0.381 MISIINRFNKHKEDHIWLRDPASSVQREAECLSQKLQHLQESYRQLMGEELSGLDTNQLKNLESQMQIGLNSVRMQKDQMFTDEIEELQEKGSFIHLKNEELHTKIDLIHEQNAELQKGYGKRKGNTILHMLSAMDMMISLFNKASNDMGYSLTLKLMKN 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00442 160 Pfam K-box region 23 106 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst3g00442 160 ProSiteProfiles K-box domain profile. 22 112 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst3g00442 160 Coils Coil 22 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00442 Spst-Chr3 7559210 7563639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00442 3 130 MADS-box Gene Family AT2G22630 46.212 1.56e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00442 K09264 - gmx:100779119 142.895