Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00440 ATGATGGGTGAAGAACTTTCTGGTTTGGGTATTAAAGAGTTGGGGAATCTGGAGAACCGATTGGAGATGAGTTTGAAGGGTGTTCGCATAAAGAAGGATCAAATTCTCATTGATGAGGTCAAAGAACTACACCAAAAGGGAAGCCTAGCTAATCAAGAAAATGTACAACTTCAGAGAAAGATAAATCTCATTAGCAAGGAAAATGAAGAACTACGAAAGGCTATTGAAGCAAAAGGTAGAAAAGAAGGTTCTGCAACATCCAATTGTCCATACACTATCACTTATGGATATGATATTCTTGCTCCTATTAGTCTCCAGCTAAGCCAGCCACAGCCTCAACACAGTGAACCACCAGCCAAAGCAATGAAACTGGGATTAAGCTGCAATAGGAAAAACTGTTCCAAAAGTAGTGATGGTGATGATCTCTGA 429 0.3986 MMGEELSGLGIKELGNLENRLEMSLKGVRIKKDQILIDEVKELHQKGSLANQENVQLQRKINLISKENEELRKAIEAKGRKEGSATSNCPYTITYGYDILAPISLQLSQPQPQHSEPPAKAMKLGLSCNRKNCSKSSDGDDL 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00440 142 MobiDBLite consensus disorder prediction 108 142 - -
Spst3g00440 142 Pfam K-box region 1 61 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst3g00440 142 ProSiteProfiles K-box domain profile. 1 67 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst3g00440 142 Coils Coil 54 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00440 Spst-Chr3 7530768 7531774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00440 1 124 MADS-box Gene Family AT3G57230 46.094 5.96e-30 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00440 K09264 - gmx:100779647 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00440 3 7530768 7531774 Spst6g00619 6 5593103 5597600 PCT