Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00435 ATGAGGTACAATATAGCTCTAGACTTGGCATCAGCATTGCTTTACCTTCAGGAAGAATGGGAAAAATGTGTGCTTCACAGGGACATCAAATCAAGCAACATCATGCTGGACTCCAACTTCAATCCTAAGCTTGGGGACTTTGGCCTGGCAAGGCTGGTGGATCATGATAAAGGGTCAGAAACCACAGATGTGGCTGGGACCATGGGTTGCCTAGCTCCTGAGTGTATGAACATAGGCCAGGCTCGAAAGGAATCTGATATATTCAGTTTTGGGATTGTTGTGTTGGAGATAGCCACGGGAAGAAAAGCCATTCACCACAAACACATGGAAGGTGAAGTATCAGTGGTTGAGTGGGTGTGGGAGCTTTATGGATTAAGGAATCTCCTTGCAGCAGTGGATCCAAAGCTGCATGGGGAATTTGATGCGCAGCAAATGGAGTGCTTACTGGTTGTTGGTCTTTGGTGTGCTAATCCAGATTCTGCAGCCAGACCCCCTGTGTAA 501 0.4711 MRYNIALDLASALLYLQEEWEKCVLHRDIKSSNIMLDSNFNPKLGDFGLARLVDHDKGSETTDVAGTMGCLAPECMNIGQARKESDIFSFGIVVLEIATGRKAIHHKHMEGEVSVVEWVWELYGLRNLLAAVDPKLHGEFDAQQMECLLVVGLWCANPDSAARPPV 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00435 166 Pfam Protein kinase domain 4 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00435 166 SUPERFAMILY Protein kinase-like (PK-like) 2 164 IPR011009 -
Spst3g00435 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00435 166 FunFam Lectin-domain containing receptor kinase A4.3 1 166 - -
Spst3g00435 166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Spst3g00435 166 PANTHER - 2 164 - -
Spst3g00435 166 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
Spst3g00435 166 SMART serkin_6 2 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00435 Spst-Chr3 7457748 7458248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00435 1 166 Receptor kinase-like Gene Family AT5G10530 57.988 2.64e-65 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst3g00435 Pkinase 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00435 - - vum:124829843 295.434