Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00433 ATGGCAGGTTGTTATTGGCGTTTTGGTCTTGATGCAATCACTCTTGGATTTTGTTATGCAAGAAGAGCCTTTTTGTTTTTCTTGATAATCCCTCTTGCAAAGGCTCATTCACAAGACTTTTCCTTTGATTACAACTTCAGAAATGCTGCTGATGTAAAACAGCTAAACCTGGTAGGAAATGTTTCTGTTTCAAATTCAGGCATCAAACTCGCAGTGGACTCAAACAATGGTGGTAGTGGGAGTGTTGGGCTAATCACAAGTCCCCAGCATCTTCACATTTGGAACAAGACCTCAAATGAACTAAAGGGCTTTGCTACTCACTTTTCCTTTATGATCAACTCAAACGAGATTTCTCATGGAGACGGGTTGGCTTTCTTCCTGGCAAACCCTAATCACTTAAATGTGAATACTATGGACGAAACAAAGCGTGGAGGCCTTGGCATTGGTCGTGTTCCAGAGACCTTTGTATATCTCTCTGTCCCGTTGAATCAATTTGTGGCAGTGGAGTTTGACACTTTCTCAAACACATGGGACCCAGTGGACACACATGTGGGTGTGAATGTCAATTCAATGAAATCTGAAATAGTTGAGAATTGGGGTTCGAATACTACTGCTTCAGGAGGCCATTATGAGTGTACAATTAAGTACAAATCGGAAGATTATTGTCTAAACGTTTCATTCACTGGATCCATGCTCAATGAAAAACGAGTAACGCAGTACCTTCTTTTTCACATTGATTTGAGAGACTACTTACCAGAGTGGGTTACTGTTGGTATAGCAGCTGCAACTGGAGATGGGTTTGATGAACACACCTTGCTGTCATGGTCATTTAATAAAAAAACAAGTAATGATAAGAAAAACGAGTTAGACAAGACAATGTTGTTGGCGGGAGTAGGAGTTGGTTTAGGTGGGGCTGTGAGTTTCTTTGCGTTGCTCCTCTTCATATTGAGGAAGAGAGGTGCGGGACAAAAGGAAGAAGCCACTTCAGAAACCGCTTCTGATTTGAAGATGGATGGTGAGTTCCAAATGGGCACTGGACCTAAGAAGATCAACTACGAGTTATTGGTATCTGCAACAGATAACTTTCAAGAGAGACACAAGCTGGGGCAAGGTGGTTTTGGTTGTGTTTATAAAGGTTATTTTAAAGACCTAAACTCCTATGCTGCAATAAAGAGGATATCAGCGGCTTCATCACAGGGTTTGAAGCAATATGCAACGGAAGTAAGGATCATTAGCCAACTGAGACATAGAAATTTGGTGAAATTTATAGGGTGGTGCCACAAGAAGAATGATCTCTTTCTGATATACGAGTACATGCCAAATGGTAGCTTATTTTCTCATCTTTTTCGTGGAGAGAGTATCTTGGCGTGGAATGTGAGGTACAACATAGCTCTGGGCTTGGCCTCTGCATTGTTTTACCTACAAGAAGAGTGGGAAAAATGTGTGCTTCATAGAGACATCAAATCATGCAACATAATGTTGGACTCCAATTTCAATGCTAAGCTTGGGGATTTTGGCCTGGCAAGGGTGGTGGTGGATAGTGAGAAAGGGTCACAAACTACAATTGCGGATGAGAAAATGGGTTACCTTGCTCCTGAATATATTAGCACAGGCAAGGCTAGAAAGGAATCTGACATGTTCAGTTTTGGGGTTGTTTTGTTGGAGGTAGCCAGTGGAAGAAAAGCCATTGACCAAAAAGACAAAGAGGGTCAAGTATCACTTGTTGAGTGGGTGTGGGAGCTCTATAGATTTAGAAATCTCCTTGCAGCAGCAGATCCAAACCTTAATGGGGAATTTGATGTTCAGCAAATGGAATGCTTGCTTGTTGTTGGTCTTTGGTCTGCTAATTCAGATAGCAACACAAGGCCCTCCATAAGGCAAGTGATTAAGGTGCTTAACTTTGAAGCTCCTTTTCCTATTCTCCCTCACCATCTATCTCATGATCAGTTATGA 1953 0.4173 MAGCYWRFGLDAITLGFCYARRAFLFFLIIPLAKAHSQDFSFDYNFRNAADVKQLNLVGNVSVSNSGIKLAVDSNNGGSGSVGLITSPQHLHIWNKTSNELKGFATHFSFMINSNEISHGDGLAFFLANPNHLNVNTMDETKRGGLGIGRVPETFVYLSVPLNQFVAVEFDTFSNTWDPVDTHVGVNVNSMKSEIVENWGSNTTASGGHYECTIKYKSEDYCLNVSFTGSMLNEKRVTQYLLFHIDLRDYLPEWVTVGIAAATGDGFDEHTLLSWSFNKKTSNDKKNELDKTMLLAGVGVGLGGAVSFFALLLFILRKRGAGQKEEATSETASDLKMDGEFQMGTGPKKINYELLVSATDNFQERHKLGQGGFGCVYKGYFKDLNSYAAIKRISAASSQGLKQYATEVRIISQLRHRNLVKFIGWCHKKNDLFLIYEYMPNGSLFSHLFRGESILAWNVRYNIALGLASALFYLQEEWEKCVLHRDIKSCNIMLDSNFNAKLGDFGLARVVVDSEKGSQTTIADEKMGYLAPEYISTGKARKESDMFSFGVVLLEVASGRKAIDQKDKEGQVSLVEWVWELYRFRNLLAAADPNLNGEFDVQQMECLLVVGLWSANSDSNTRPSIRQVIKVLNFEAPFPILPHHLSHDQL 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00433 650 Gene3D - 37 295 - -
Spst3g00433 650 CDD STKc_IRAK 368 633 - -
Spst3g00433 650 FunFam L-type lectin-domain containing receptor kinase IX.1 347 438 - -
Spst3g00433 650 Pfam Protein kinase domain 362 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00433 650 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00433 650 SMART serkin_6 362 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00433 650 Pfam Legume lectin domain 39 288 IPR001220 GO:0030246
Spst3g00433 650 CDD lectin_legume_LecRK_Arcelin_ConA 40 278 IPR001220 GO:0030246
Spst3g00433 650 ProSitePatterns Legume lectins beta-chain signature. 166 172 IPR019825 -
Spst3g00433 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Spst3g00433 650 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Spst3g00433 650 FunFam Lectin-domain containing receptor kinase A4.3 439 649 - -
Spst3g00433 650 PANTHER - 67 635 - -
Spst3g00433 650 Gene3D Transferase(Phosphotransferase) domain 1 439 643 - -
Spst3g00433 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 281 IPR013320 -
Spst3g00433 650 SUPERFAMILY Protein kinase-like (PK-like) 343 634 IPR011009 -
Spst3g00433 650 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00433 Spst-Chr3 7441820 7443772 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00433 24 645 Receptor kinase-like Gene Family AT5G10530 42.362 1.56e-155 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst3g00433 Pkinase 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00433 - - cam:101492002 681.789