Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00429 ATGGATTTCCCTCCTGTCCTCAATCTTCTCACACAATTTGGATGCGGCTTCGTCCTTCTACGCTCCCTCTCGCGCTTTTTCAACATTTTAGGCCTCTTTTTGATGCTCACCTTTTGGTTCAAGGTTTGGCGCTTCGGCTGGAATTCCAAGAGCGCCGTTCGATTCCTCTGCGACTCTGGAACCGTACCCAAAATCCGCTTCTGCCTCGACAAAGTTGCGTGGGGAGGTTCTAAAGCAAAGACCAGACCTTTCAAAAAAGTGCGCCGGCCCAGGTCGAGTTCCTCCATCAGGAGGCGCTCCAAAAGCTCCCGACAGAGAGGCAACGCAGGTTCCGAAGATGGGTCGGAGGGGAGGGGCGAAAACGAGAGGGATATCGGCCTCGAGGACGAGGTGTACGATGTAACGACGCTGAGAAAAATGGTGAAGATAGAGAGACTGAAGGCCAATGCGGCGTGTGCAGACCTCGAGACGGAGAGGACAGCGGCTGCCTCGTCGGCGGAGGAGGCAATGGCGATGATTCTGCGGCTACAAAATGAAAAGAGCTCCGCAGAGATTCAGGCCACGCAGTTTCGGCGAATGACGGAGCAAAAGCTAGATTACGACCAGGAAGTGATTGAGTCGTTGCAGTGGACCATCACGCAACACGAGTTGCAGAAGGCTGAGTTGGAGGATCAGGTGGAAATTTGTAGGGATGATTTGAGGCAGTTTATGAGGGACGAGGATATAGAACAAATTGAAGTTGAAGTGAGTCGGGATTATACCTATAATGATGATGATGATGATGATGATGGTGGTGGTGGTGACTGTGATGGTAATTCTGTAGTTAGCTCTCCCGGAACCGAATCACAGATCTTGATTGACGCCTGGAGGATGCGTGTTATGTACCCTATATGCACTCAACTACACATCATGATGGGTAACACTCCTAACTTTCTGGTTTATGGTTGTAAATTTGTTGAGAATTGGATTGAAGCACTTTCGTGCTGTTCTGATGCTAGCTCACTTGAAATTGCAGGATTCTTTGTAGTGGACGTGTTCAATTAG 1044 0.4962 MDFPPVLNLLTQFGCGFVLLRSLSRFFNILGLFLMLTFWFKVWRFGWNSKSAVRFLCDSGTVPKIRFCLDKVAWGGSKAKTRPFKKVRRPRSSSSIRRRSKSSRQRGNAGSEDGSEGRGENERDIGLEDEVYDVTTLRKMVKIERLKANAACADLETERTAAASSAEEAMAMILRLQNEKSSAEIQATQFRRMTEQKLDYDQEVIESLQWTITQHELQKAELEDQVEICRDDLRQFMRDEDIEQIEVEVSRDYTYNDDDDDDDGGGGDCDGNSVVSSPGTESQILIDAWRMRVMYPICTQLHIMMGNTPNFLVYGCKFVENWIEALSCCSDASSLEIAGFFVVDVFN 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00429 347 PANTHER BNAANNG28530D PROTEIN 123 249 - -
Spst3g00429 347 Coils Coil 166 186 - -
Spst3g00429 347 Coils Coil 205 239 - -
Spst3g00429 347 ProSiteProfiles GTD-binding domain profile. 132 230 IPR007656 -
Spst3g00429 347 MobiDBLite consensus disorder prediction 251 278 - -
Spst3g00429 347 Pfam Zein-binding 136 226 IPR007656 -
Spst3g00429 347 MobiDBLite consensus disorder prediction 81 104 - -
Spst3g00429 347 MobiDBLite consensus disorder prediction 80 122 - -
Spst3g00429 347 MobiDBLite consensus disorder prediction 253 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00429 Spst-Chr3 7396785 7398116 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00429 - - pvu:PHAVU_002G214800g 411.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00429 3 7396785 7398116 Spst6g00613 6 5549367 5557845 PCT