Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00393 ATGGTGTGCCAAGCAGCGAGCCAAACAAGATTCCGAGCATTAAAACATGAGTATGGCATTGAAGGTGAAGCAACAATTATTGTTAGAGTGATAGCATGCTTTCAACCTTTGCATTTTTGTCAGGCTGAGTACTTCCGTCATTTGCTTAAGCCTATGGTTAAAGCTGACAGGTCCTTGCCTTGCTCACACCATGTGGCTTGGCAATCACCTTTGAATAACTTCAGCATGCTGCCTAAGCCCAGTTCACTTGGTCTCCCAACATTTCTGAGCTCAAGCACTTCCATCTTACCCCATGGGCTTGCAGCTCCTTCTATCCGAAGTCTGAAGACTGAGCTAACAAATGAAGTGCAGGGATACCTTCAGTATTACAACACAGACACAAGTTTGAAAGAAACGCATCTTGGAGGAGCTTTACAAAGTGCAAATCCCTCTTTGAAGAAGAGGTTACTGATCTTTGACCGCTCTGATAATAAAACAAGGTTGTTTTATGGTCCTATCCCTCTTGTCCAGACTCCAACTGTTACTGCTACGAAGTTTGCTCAAAGTTATAACTTAAATGGGGAGGAACAGGCTAGTAATGAGGGTCAAAAGCATCTTGCCAGTTACAGTTTACTGGAAGAGTCTGTTAAGGATCATGCAGTTCTTGAAGAAAGTGAAAAGCATGAAGATACAGAAGAAATAAATGCATTGCTTTATTCCGATGATGACAGCAGTGAATATGATGATGATAATTGTGATGAGGTAACAAGTACAGATCGTTCTCCTTTGGCAAGTAAAAGGACTTATGCGATACCAGAACAATTTGAAGACTTGAAGGAGGAGGTTGCTAGTTCTTATTCGCATAACAAACGGCTGAAGTTAATTCATGATGACGACAATAGATCATCCCCACATGCGGACATATGTAATTTGGTAAAACCAAATGAACCCTGGGACAGTGTTAGTGATGCTGAATCAAAGTACTCTAGTGGCTGGACATATTCTGTTCATAAAACTAAAGTAGATGATTCAGTGGTGTGTGATATCAAATTAAGAAAGGATAAGATCCGCGAATCTTTGACAGTTCTCGAGAATTTAATTCCTGGTGCAAAAGGAAAGGAGCCAATCTCAGTCATTGATGGAACTATTGAGTACTTGAAAATTTTGATGTCCCAAACTGGTTCTCTTGGGGTGGAATATCACTAA 1185 0.4076 MVCQAASQTRFRALKHEYGIEGEATIIVRVIACFQPLHFCQAEYFRHLLKPMVKADRSLPCSHHVAWQSPLNNFSMLPKPSSLGLPTFLSSSTSILPHGLAAPSIRSLKTELTNEVQGYLQYYNTDTSLKETHLGGALQSANPSLKKRLLIFDRSDNKTRLFYGPIPLVQTPTVTATKFAQSYNLNGEEQASNEGQKHLASYSLLEESVKDHAVLEESEKHEDTEEINALLYSDDDSSEYDDDNCDEVTSTDRSPLASKRTYAIPEQFEDLKEEVASSYSHNKRLKLIHDDDNRSSPHADICNLVKPNEPWDSVSDAESKYSSGWTYSVHKTKVDDSVVCDIKLRKDKIRESLTVLENLIPGAKGKEPISVIDGTIEYLKILMSQTGSLGVEYH 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00393 394 MobiDBLite consensus disorder prediction 231 254 - -
Spst3g00393 394 MobiDBLite consensus disorder prediction 231 246 - -
Spst3g00393 394 PANTHER TRANSCRIPTION FACTOR BHLH145 61 392 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00393 Spst-Chr3 6832286 6833895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00393 135 394 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09460 34.328 4.91e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00393 - - gmx:100817942 507.294