Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00385 ATGGGATCCATTCTCTGTGATTCTATCAGTTCTAAAGCTTCCTGTGACTCTATCAGTACTAAAGCTTACTGTGATTCTATCAGTACAAAGGCTTGTGATGGTTCAAGTCAAGAAGGAGAAACTAGCTTACTAGAATTGATGAGCAAAGAAGAATCTATTATAAATGTGATCGATGCAGAAGAAGAAGAAGTTCATGATGAAGGTGATGACACCATGTCAATAGAAATGAGTGGAGTAGTTCCAATAGAGAAGGAGGACATCACCGTTACATGGGAGAATTTGTGGGTCACTGTTTCAAGTGGAAAGAAAAAGAAGTCAATTTTGCAGGGTCTTACAGGTTATGCTAGTCCAGGGAGGATTCTGGCCATAATGGGTCCATCAGGATGTGGAAAATCTACACTTCTTGATTGTTTATCAGGAAGATTGAGCTCAAAAATGAAACATACAGGGAAGATTCTAATCAATGGCCAGAAACAAGTACTGGCCTATGGGACATCAGGCTATGTAACACAAGAAGATGCTATGCTGTCAACTTTAACCACTAGGGAAACTTTGTACTATTCTGCTCAGCTCCAGTTTCCAGATTCCATGTCCATAGCAGAGAAGAAGGAACAAGCAGATATAACACTCAGAGAAATGGGTCTGCAAGGTGCCATTAACACAAGGGTTGGAGGGTGGGGTTCTAAAGGCCTCAGTGGAGGACAAAAGAGGAGACTTAGCATCTGCATTGAGATTCTAACTAAACCAAGACTTCTCTTCCTTGATGAACCAACAAGTGGACTTGATAGTGCAGCTTCCTACTATGTTATGAGTAGCATTTCAACTCTAAATCTTAGAGATGGAATTCGAAGGACTATTGTTGCATCCATCCATCAGCCTAGCAGTGAAGTTTTTGAACTTTTTCATGACCTCTGTCTTCTGTCTTCTGGTGAAACTGTATATTTTGGTCCAGCCTCTGAAGCAAATCAGTTTTTTGCTTCAAATGGTTTCCCATGCCCAACTCTTCACAATCCTTCTGATCACTACTTAAGGATCATAAATAAAGATTTCGAACAGGATGCTGAAGAAGGCCTTGGTAAGGGAGTAAGTACAGAAAATACAATTGATAACCTTATAGCTTCTTACAGGATGTCTCAAATTAGAAAACAAGTTAAACTGGAAGTGGGAAAAATAGTTGAAAATGATTCTGGTGCAACAAGGAAGCACAGGATTCATGCTGCATTTCCTACTCAATGCCTTGTTCTATTAAAAAGATCTTCATTGCAGTTCTTTCGTGACATAAGCAATTACTGGCTACGTTTAATTGTCTTTATTATAATAGCCATCAGCATTGGCTCTATCTTCTATAACATAGGCACAGACGAAGCATCTATTCAGGCGAGAGGTTCGCTGCTCATATTTTTAGTTTCAGTTCTGACTTTCATGACCCTTGTTGGTGGATTTTCTCCCCTCCTGGAGGACATGAAGGTATTTGAACGAGAGAGATTGAATGGGCACTATGGTATCACAGCATTTCTCATAGGGAACATATTCTCTTCTGTTCCTTACATGCTAATGATCTCTCTTATTCCTGGAGGAATAGCGTACCAACTTTGTGGTCTGCACAAAGGAATAGATCGCTTCTTCTACTTCTCTTCTGTGCTATTTGCCATAGTGATGTGGGTTGAGAGCCTTATGTTGGTGATTGGGAGCATCTCCCCCAACTTTGTGATAGGCATGTTCATTGCTGGTGGAGTTGAAGGACTCATGATCTTAACAGGTGGATTCTATAGACTGCCAAATGATCTTCCCAAGCCATTATGGAAGTACCCTTTCTACTATGTTTCCTTCCTCAAGTATGCCTTCCAAGGATCCTTCAAGAATGACTTTGATGGCTTAACATTTTCTGTGCACCAAGATGGAGCCACCAAAAGCATGAGCGGCAGAGAAGTACTAGTTAACACATGGCATGTGGAAATGAGTCACTCTAAGTGGTTTGATCTTGCAGTCATGGTTGGAATGATTCTTCTGTATCGAGTTCTGTTCTTGGTCGTCACTAAGTGCAAGGAGAAGCTGAAGCCTGTGGTAGCATCCTTTACTCGTCGACCATAG 2091 0.4099 MGSILCDSISSKASCDSISTKAYCDSISTKACDGSSQEGETSLLELMSKEESIINVIDAEEEEVHDEGDDTMSIEMSGVVPIEKEDITVTWENLWVTVSSGKKKKSILQGLTGYASPGRILAIMGPSGCGKSTLLDCLSGRLSSKMKHTGKILINGQKQVLAYGTSGYVTQEDAMLSTLTTRETLYYSAQLQFPDSMSIAEKKEQADITLREMGLQGAINTRVGGWGSKGLSGGQKRRLSICIEILTKPRLLFLDEPTSGLDSAASYYVMSSISTLNLRDGIRRTIVASIHQPSSEVFELFHDLCLLSSGETVYFGPASEANQFFASNGFPCPTLHNPSDHYLRIINKDFEQDAEEGLGKGVSTENTIDNLIASYRMSQIRKQVKLEVGKIVENDSGATRKHRIHAAFPTQCLVLLKRSSLQFFRDISNYWLRLIVFIIIAISIGSIFYNIGTDEASIQARGSLLIFLVSVLTFMTLVGGFSPLLEDMKVFERERLNGHYGITAFLIGNIFSSVPYMLMISLIPGGIAYQLCGLHKGIDRFFYFSSVLFAIVMWVESLMLVIGSISPNFVIGMFIAGGVEGLMILTGGFYRLPNDLPKPLWKYPFYYVSFLKYAFQGSFKNDFDGLTFSVHQDGATKSMSGREVLVNTWHVEMSHSKWFDLAVMVGMILLYRVLFLVVTKCKEKLKPVVASFTRRP 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00385 696 Pfam ABC-2 type transporter 410 621 IPR013525 GO:0016020|GO:0140359
Spst3g00385 696 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524|GO:0016887
Spst3g00385 696 SMART AAA_5 117 310 IPR003593 GO:0016887
Spst3g00385 696 Pfam ABC-2 type transporter 291 348 IPR043926 GO:0140359
Spst3g00385 696 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 334 IPR003439 GO:0005524
Spst3g00385 696 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 76 691 - -
Spst3g00385 696 Gene3D - 88 348 IPR027417 -
Spst3g00385 696 FunFam ABC transporter G family member 11 87 374 - -
Spst3g00385 696 CDD ABCG_EPDR 87 316 - -
Spst3g00385 696 Pfam ABC transporter 109 259 IPR003439 GO:0005524
Spst3g00385 696 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00385 Spst-Chr3 6710857 6716429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00385 118 295 Calmodulin-binding Proteins AT2G36910 31.351 5.72e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00385 K05681 - gmx:100790102 1050.43