Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00379 ATGAGGCAAATCGGGGAGATTTTGATCAATGGTAAAAAGCAACCTTTGACTTATGGAACCTCAGCATATGTCACACAAGATGATACCTTATTGACAACCTTAACGGTTGGAGAAGCAGTGCACTATTCAGCTCAGCTCCAATTACCTGACACCATGTCAAAAGAAGAGAAGAAAGAGATAGCAGACTTTACAATCAGAGAAATGGGTCTTCAAGATGCCATTAACACAAGGATTGGAGGATGGGGTTGTAAAGGGATTAGTGGGGGTCAGAAGCGGCGAGTCAGCATCTGCATTGAGATCCTAACACGCCCTAAACTTCTGTTTCTTGATGAACCAACTAGTGGACTAGACAGTGCAGCTTCATATTATGTCATGAGAAGAATCGCTTCCCTTGCTCAAAATGACCACATTCAGAGGACTGTTATTGCATCAATCCATCAACCCAGTACTGAAGTTTTTCAACTCTTCAATAACCTTTGTCTTTTGTCTTCAGGAAAAACAGTTTACTTTGGACCTGCTTCTGCTGCAAGTGAGTTTTTCGCTTCGAATGGCTTTCCTTGTCCTCCTCTCATGAATCCATCTGATCATTTACTGAAAACTATAAACAAGGATTTCGATCAGGACATTGAGGTGGGTTTAGCTGGAACTAGAAACATACCCACAGAAGAAGTAATCCACATTCTTGTGAACTCATACAAATCATGTGAAAGGAATCAAGAAGTTCAAAATGAAGTAGCTTTACTATCTAAGAAGGTAATTACCCTCAATGCTTCTATTCTAATAGATGCTAACATTGCAGATGCCTATGTTAACATGAACATTGATTGGTTCCAGGACACCAGTTCATTGGATATTAAGAGAGGGCATGCGGGTTTCCTTAATCAATGCTCAGTTCTTACCAAAAGATCTTTTGTGAACATGTATCGTGATCTTGGTTATTATTGGCTTCGATTAGCCATATACGTTGCATTGGCTATAAGTTTAGCCACTATTTTCTATAATTTGGGCACAAGTTATGACTCAATTAAGGATCGAGGTTCGCTTGTTGCATATATAAACGGATTCTTGACATTCATGACCATTGGTGGATTCCCTTCCTTCGTGGAAGTCATGAAGGTATTTCAAAGAGAAAGACAAAACGGACATTATGGTGTCACTGCATTTGTGATTGGAAACACCTTGTCATGTATCCCATACTTGCTATTGGTTGCATTCATTCCTGGGGTTATATCTTATTTCCTTCCAGGTCTTCAGGTTGGATGGGATCACTTTGTGTATTTCGTTTGTGTCTTATTTTCAAGTCTCATGTTAGTGGAGAGCCTTATGATGATAGTTGCAAGCATTGTTCCCAACTATCTAATGGGCATCATAACTGGTGCTGGAATTCAAGGAATCATGATTTTAGTCTCTGGGTTCTTTAAGTTGCCAAACGATATTCCCAAGCCAGTTTGGAAATACCCTTTACACTATGTTGCTTTTCATACCTTTGCCAACCAAGGAATGTTCAAGAACGAATATGAAGGACTAAGATTTGTTACCAATGATGGAAGAAGCTCACACGGTCACATAAATGGTGAAGAAGTCTTGAGAAATATATGGCAAGTTGACATGAGTTACTCAAAGTGGGTTGATCTTGCAATCTTGGCAGGGATGATTGTTGTATATCGAGTTTTATTTTTGGTTATTATCAAGATTAAAGAGAAGGTGAAGCCAATTGTTGCATCACTATCGTGCATGTCAGCGTCTCCCAAGAGATCAATACAAGTCATGGAAAACCCCAATGCCACTCCATTACATTGA 1800 0.395 MRQIGEILINGKKQPLTYGTSAYVTQDDTLLTTLTVGEAVHYSAQLQLPDTMSKEEKKEIADFTIREMGLQDAINTRIGGWGCKGISGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYYVMRRIASLAQNDHIQRTVIASIHQPSTEVFQLFNNLCLLSSGKTVYFGPASAASEFFASNGFPCPPLMNPSDHLLKTINKDFDQDIEVGLAGTRNIPTEEVIHILVNSYKSCERNQEVQNEVALLSKKVITLNASILIDANIADAYVNMNIDWFQDTSSLDIKRGHAGFLNQCSVLTKRSFVNMYRDLGYYWLRLAIYVALAISLATIFYNLGTSYDSIKDRGSLVAYINGFLTFMTIGGFPSFVEVMKVFQRERQNGHYGVTAFVIGNTLSCIPYLLLVAFIPGVISYFLPGLQVGWDHFVYFVCVLFSSLMLVESLMMIVASIVPNYLMGIITGAGIQGIMILVSGFFKLPNDIPKPVWKYPLHYVAFHTFANQGMFKNEYEGLRFVTNDGRSSHGHINGEEVLRNIWQVDMSYSKWVDLAILAGMIVVYRVLFLVIIKIKEKVKPIVASLSCMSASPKRSIQVMENPNATPLH 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00379 599 Pfam ABC-2 type transporter 295 506 IPR013525 GO:0016020|GO:0140359
Spst3g00379 599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 178 IPR027417 -
Spst3g00379 599 Gene3D - 2 181 IPR027417 -
Spst3g00379 599 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 577 - -
Spst3g00379 599 Pfam ABC-2 type transporter 146 250 IPR043926 GO:0140359
Spst3g00379 599 Pfam ABC transporter 14 114 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00379 Spst-Chr3 6620112 6622385 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00379 50 150 Calmodulin-binding Proteins AT2G36910 33.663 2.37e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00379 K05681 - gmx:100794527 980.704