Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00372 ATGGCAAGTAGAAAAGAAAAATGTATACAGTGTGGAATTGCACTGGTGGTGCCAGCAGATGTGTATGTGTTTGAGTGCGGAGTGTGCCATGGCATCACCCAGATAAGACCCTCGACAGGTCCATGGAGTCAAGCCTACAACTCCTTTCATAATTTCAAAGGTCGTTTTCGAGGGTTTATAAATAGCATAAGTAGTTCAGTTAACAGCAATTCAGGTGGTTTTTCTGGGACCAATAATTTTGGGTCTTATCCTCAGCCTCAGTCTGTAAGACCTTCATACCATGCCTATGGCTCAAAGCGAGCTGTGCTGTGTGGAATTCGCTACCATGGGAAGAGTTACAAGCTAAAAGGCTCCGTCAATGATGCAAAATGCATGAAATACTTTCTCATTAAGCAGTTTGGATTCCCTAGCGACTCCATTCTCATGCTCACAGATGATTGGGATGAGAGAAACCCGCTAAGGATCCCGACGAGATATAACATTGCAATGGCCATGAGGTGGCTGGTTGAGAATACCCAGTCAGGGGATTCATTGGTGTTCCACTTCTCTGGACATGGCACTCAGGAAAGGAACTTCGATGGGAACGAAATTGATGGGTTTGATGAAGCAATATGTCCCGTTGATTATGAAGAGAAAGGGAAGATACTCGATGATGAGATTAACTCTACAATTGTTAGGCCGTTACCTCGTGGAGCTAAACTTCATGCCATTGTCGATGCCTGCCACAGTGGAACTGTTCTTGATTTACCTTTTGTCTGCAAGATGAACAGGGAAGGTTATTACTCATGGGAAGATCAAAGATTTCCCAGAGTTAATAAAGGTACAAGAGGAGGGCTAGCAATTTCTATATCAGCTTGTGAGGATGGTCAAACCTCCCTAGATACCAACGCCCTTAGTGGCAATGAATCTACTGGTGCATTGACCTATAGCTTCATCCAAACCGTGCAAAACCAACCTGGTCTGAGTTATGGTCACTTGCTGACTGCCATGCGTTCAACCGTACGTGGGGCAAGTGCAGGCATACTGCAATTGAATGGTCCAATTGCTTCACTGTTCAACAGACTTATGGGCATGGAAATACGACAGAGGAGGAGAACAGAAAAGAACACTTCGCGCGGAAGAGCCGAGTCTGGTGAGGTTGCGTACGAGCACCGACGACCGCAAAATGAAACGGGAGTGCGCAACCTGGGTTTAGAGAACGAACGCCCAAATTTGTCAGATTTCACAGGTTGTATAGAAAGTGATGTTTACAACCAGGAGTTTGTAGCCACAACTGATGCAGAAGCCACCACCAAGTCCAAAGAAAGAAACACAACTACTAAGACCAAGGAAGAGGGTATCTTCCTCACATGGGAGGATTTGCAGGTCACAGTTCCCAATGGAAGGCAAGGTAGCATACCAATTCTTAAGGGTCTGACAGGTTATGCCAAACCAGGTCAGCTCTTGGCAATAATGGGTCCTTCTGGCTGTGGCAAATCCACACTTCTTGATGCTTTAGCAGGAAGACTGGGTTCAAGCACAAAGCAAACAGGGGAAATTCTAATTAATGGTCACAAACATGCACTGGCTTATGGAACATCTGCATATGTAACACATGATGATGCTGTGTTATCAACATTAACAGTAGGAGAAACAGTGTACTATTCAGCCCATCTCCAATTTCCAGATTCAATGTCCAACACAGAGAAGAAAGAGAGAGTGGACTTCACAATCAGACAAATGGGTCTACAAGATGCCACTGACACAAGGGTTAAAGGGAAGGGTTCTAAAGGCCTTAGTGAGGGGCAAAAGAGGAGACTAGCCATTTGTATTGAGATTCTTACAAGCCCCAAACTTCTCCTTCTTGATGAACCAACTAGTGGCCTGGACAGTGCAGCTTCCTACTATGTCATGAGCAGAATTGCAAGCCTAAAGATAAGAGATGGCATCAAAAGGACTATTGTTGCATCCATCCATCAGCCTAGTAGTGAAGTTTTTGAGCTATTTGATAATCTTTGTCTTTTGTCTTCAGGTGAAACAGTATATTTTGGTACCACTTCTGCTGCAACCGAGTTTTTTGCTTCAAATGGTTTTCCTTGTCCATCTCTCCACAACCCTTCTGATCATTTCTTGAGGATCATAAACAAGGATTTCAAACTGGGTGATAAAGAATGCTTCCTCGTAATAGTACCCAAAGAAGAAGCAGTAGATATACTTGTGAGGTTTTATAAATCTTCTGAAATTAGTAACCAAGTTCAGAAAGAAGTAGCAGCAATAGGTGAAAGTGAATATGGTTTCATGGAGAGGAACAGAACACAAACTGCATTTCTTACTCACTGTCACGTTCTAGTGAGAAGATCTTCATTGCACTTGTTTCGCGATGTAAGCAATTATTGGTTGCGTCTAGCCATGTTTGTTGTAGCAGCTATTAGTCTGGGAACTATATTCTTCGACGTTGGTTCAAGTAATTCATCTATCCAGGCTAGAGGGGCACTGGTCTCATTTGTTGCATCAGTCCTAACTTTCATAACCCTTCTTGGTGGATTTCCTCCATTTGTGGAACAAATGAAGGTATTTCAACGTGAGAGATTGAATGGGCACTATGGTGTTGCTGCTTTTGTCATTAGCCACACGTTGTCACCTATTCCATATATGGTACTGATGTCACTGATTCCTGGAGTAATCACGTATTACCTTTCTGGACTTCACACAGGACTTGAACGTTGCCTCTACTTTTCTAGTGTACTACTTGCATGTATATTGTGGGTTGAGAGCCTCATGATGGTGGTTTCTAGCATCTTCCCCAATCCCAATACGGGCATCACAGTCTCTGGTGGAATCATGGGAGTCATGATTTTAACTGGTGGATTCTATCGCCTGCCAAATGATCTCCCCAAACCATTTTGGAAATACCCTATGTACTATATTTCCTTCCACAAATATGCCTTCCAAGGATTGTTCAAGAATGAGTTTATTGGTCTGAAGTTGGCTAGTGATCAAGATAAAGGTACCTACATAAGTGATAGGGAAATACTAACAAAGACATGGGAAGTGGAAATGGGTCACTCAAAATGGGTTGATCTTGCTATCTTAATGGGAATAATTGTTTTATATAGACTTATGTTCTTGGTAATCATTAAGAGTAAGGAGAAGATGAGGTCTTGA 3144 0.4288 MASRKEKCIQCGIALVVPADVYVFECGVCHGITQIRPSTGPWSQAYNSFHNFKGRFRGFINSISSSVNSNSGGFSGTNNFGSYPQPQSVRPSYHAYGSKRAVLCGIRYHGKSYKLKGSVNDAKCMKYFLIKQFGFPSDSILMLTDDWDERNPLRIPTRYNIAMAMRWLVENTQSGDSLVFHFSGHGTQERNFDGNEIDGFDEAICPVDYEEKGKILDDEINSTIVRPLPRGAKLHAIVDACHSGTVLDLPFVCKMNREGYYSWEDQRFPRVNKGTRGGLAISISACEDGQTSLDTNALSGNESTGALTYSFIQTVQNQPGLSYGHLLTAMRSTVRGASAGILQLNGPIASLFNRLMGMEIRQRRRTEKNTSRGRAESGEVAYEHRRPQNETGVRNLGLENERPNLSDFTGCIESDVYNQEFVATTDAEATTKSKERNTTTKTKEEGIFLTWEDLQVTVPNGRQGSIPILKGLTGYAKPGQLLAIMGPSGCGKSTLLDALAGRLGSSTKQTGEILINGHKHALAYGTSAYVTHDDAVLSTLTVGETVYYSAHLQFPDSMSNTEKKERVDFTIRQMGLQDATDTRVKGKGSKGLSEGQKRRLAICIEILTSPKLLLLDEPTSGLDSAASYYVMSRIASLKIRDGIKRTIVASIHQPSSEVFELFDNLCLLSSGETVYFGTTSAATEFFASNGFPCPSLHNPSDHFLRIINKDFKLGDKECFLVIVPKEEAVDILVRFYKSSEISNQVQKEVAAIGESEYGFMERNRTQTAFLTHCHVLVRRSSLHLFRDVSNYWLRLAMFVVAAISLGTIFFDVGSSNSSIQARGALVSFVASVLTFITLLGGFPPFVEQMKVFQRERLNGHYGVAAFVISHTLSPIPYMVLMSLIPGVITYYLSGLHTGLERCLYFSSVLLACILWVESLMMVVSSIFPNPNTGITVSGGIMGVMILTGGFYRLPNDLPKPFWKYPMYYISFHKYAFQGLFKNEFIGLKLASDQDKGTYISDREILTKTWEVEMGHSKWVDLAILMGIIVLYRLMFLVIIKSKEKMRS 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00372 1047 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 695 IPR003439 GO:0005524
Spst3g00372 1047 Gene3D - 447 690 IPR027417 -
Spst3g00372 1047 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 435 1046 - -
Spst3g00372 1047 Pfam ABC-2 type transporter 652 709 IPR043926 GO:0140359
Spst3g00372 1047 Gene3D - 64 344 - -
Spst3g00372 1047 SMART AAA_5 478 672 IPR003593 GO:0016887
Spst3g00372 1047 Pfam Caspase domain 99 335 IPR011600 GO:0004197|GO:0006508
Spst3g00372 1047 Pfam ABC-2 type transporter 773 984 IPR013525 GO:0016020|GO:0140359
Spst3g00372 1047 MobiDBLite consensus disorder prediction 362 387 - -
Spst3g00372 1047 Pfam ABC transporter 469 620 IPR003439 GO:0005524
Spst3g00372 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 449 686 IPR027417 -
Spst3g00372 1047 FunFam ABC transporter G family member 11 447 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00372 Spst-Chr3 6547364 6560387 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00372 435 678 Calmodulin-binding Proteins AT2G36910 28.346 2.57e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00372 K05681 - gmx:100784793 1138.25