Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00368 ATGTTTAGAAGAGAGGTGGATGGTTGGCATGATGCATGTCCAGAAGATCAGTTGATGGTGGTTGGAGGACGTTCTTCATGTACCTCGGGCAAGGGAAAGAGCAGCCAGTCCTCGGTCAAATATGGATATAGCCTAGTTAAAGGGAAAGCAAACCACCCCATGGAGGACTACCATGTAGCAAAATTTGTCCAGTTCAAAGGGGAAGAGCTTGGGCTTTTTGCTATATTTGATGGACACCTGGGAGATAGTGTACCGGCCTATTTACAAAAGCATCTGTTTACTAATATCTTGAAGGAAGGGGACTTCTGGAATGATCCATTCATGTCCATTTCCAATGCATATGAAACAACAGACCAGGCAATTCTTTCTCACAGTCCTGATTTGGGGCGAGGAGGATCAACTGCAGTGACTGCAATTCTCATAAATAATCAGAAATTATGGGTTGCCAATGTTGGAGATTCGCGAGCTGTTGTGTCAAGGGGAGGGGAGGCTGCACAAATGACAACTGATCATGAGCCCAATACTGAGCGGGGCAGCATTGAGACCAAAGGTGGCTTTGTCTCAAACATGCCAGGTGATGTTGCAAGGGTGAACGGTCAGCTAGCAGTTTCTCGAGCCTTCGGAGACAAAAACCTAAAAACACACTTGCGATCTGATCCTGACATCCAGTACACTGATATTACCCCAGATATTGAGCTTTTGATACTTGCTAGTGATGGTCTATGGAAGGTAATGGCAAATCAAGAAGCTGTTGATATTGCAAGAAGAATAAAGGATCCACAAAAAGCAGCCAAACAACTAGCCACTGAGGCATTGAACAAAGACAGTAAGGATGATATTTCCTGCATTGTAGTTCGTTTCAAGGGTTGA 870 0.446 MFRREVDGWHDACPEDQLMVVGGRSSCTSGKGKSSQSSVKYGYSLVKGKANHPMEDYHVAKFVQFKGEELGLFAIFDGHLGDSVPAYLQKHLFTNILKEGDFWNDPFMSISNAYETTDQAILSHSPDLGRGGSTAVTAILINNQKLWVANVGDSRAVVSRGGEAAQMTTDHEPNTERGSIETKGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQYTDITPDIELLILASDGLWKVMANQEAVDIARRIKDPQKAAKQLATEALNKDSKDDISCIVVRFKG 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00368 289 PANTHER PROTEIN PHOSPHATASE 35 287 IPR015655 GO:0004722|GO:0006470
Spst3g00368 289 SMART PP2C_SIG_2 51 287 IPR001932 -
Spst3g00368 289 SMART PP2C_4 36 285 IPR001932 -
Spst3g00368 289 Gene3D - 24 289 IPR036457 -
Spst3g00368 289 SUPERFAMILY PP2C-like 35 288 IPR036457 -
Spst3g00368 289 CDD PP2Cc 39 287 IPR001932 -
Spst3g00368 289 ProSiteProfiles PPM-type phosphatase domain profile. 40 287 IPR001932 -
Spst3g00368 289 Pfam Protein phosphatase 2C 49 280 IPR001932 -
Spst3g00368 289 FunFam Probable protein phosphatase 2C 39 31 288 - -
Spst3g00368 289 MobiDBLite consensus disorder prediction 160 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00368 Spst-Chr3 6486498 6489607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00368 12 288 PP2C-type Phosphatase Gene Family AT1G22280 69.258 1.26e-140 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00368 K17506 - gmx:100801722 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00368 3 6486498 6489607 Spst3g00368 3 6486498 6489607 ECH
Spst3g00368 3 6486498 6489607 Spst6g01700 6 16203255 16207292 PCT