Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00365 ATGGCGGAGCGTGCTTCTTACGGATTGGGACCTCGATTAGATCTTCAGCAATTACAACTTGAAGCTCAGCATAGGTGGTTACGCCCTGCAGAAATATGTGAAATTCTTTGCAATTATCGGATGTTTCAAATCACATCAGAACCACCTAACAGGCCACCGAGTGGTTCCCTTTTTCTATTTGATCGGAAGGTTTTAAGGTGGGAAGTGTTGATGTGTTACACTGCTACTATGCCCATGGAGAAGAAAGTGAAAATTTTCAGAGGAGAAGCTATTGGATGCTTGAACCGTGAGTGTGATGTACTAGTTTACATTCCATTAGCTGTCTTTAAACTTGAAGTTAACAAAACCAATGTTGGTGGAAAAACATATTCTGGTGAGTCTACATCAGATTCCCAGAAGGGAAGTTCCTTGTCATCTGGCTTTCCCAGAAATTATGGTAGTGTGCCGTCAGGAAGTACAGATTCCTTGAGCCCAACCAGCACTTTGACGTCTTTATGTGAAGATGCTGATTCAGTGTTCTGTCCATTTGGTCTAAATGGTTTAATCAAACTCTTCCTAGAGGATATTCATCAAGCAAGTTCAGGATTACAATCCTATCAAGAATCACAAAGTTTGGGGAATGATCGCCTAATGGATAAGATTGATGCTCGTTCAAATAGTTCACATCTTATGCATCCATTTTCAGGTGATCATGGACAGTTACCAGTTTCCGGAGCAGAATATATCCCACTTGTTCAGGGCGGTAAGTCTAGGGGTAGTGATACCACTTACATTGAGGGTCATAGAGCACATGGTATTGCATCTTGCGACAATGCCATGGAGCAGTCTGCAGGAAAGCATCCTGATCCTTCTCTTGTATCATCCACAGCCATTATATCAAGTGCATCGGGAAGCATACTTGAAGAAAACAATATTGTTTCAGGCAACCTTTTAGAGCGTATAAATGCCCTCACTGAAGAGGAAAGGGGACCTCAGCCTATCCACTCAAATTGGCAGCACAAAGATGAGGAAACCAAAGTTATTGCAATAATGGTGGAACAGCACCATGCTGCTCCTCCATGGACGGTCATGTCATCATGTGATGTGTTTCATGCTCTAGAGCATCTGCACCTTCTTGCTTCTGATTTGCACTTCTGGAATACCTTCCTGCTTCCTCACTTTAGTCAACCTCTGCTCTATAACATCAAACTCGATTGCTTGATGGGCTATATGATTCCTTTGGAAGGCGATACAGGAGAATTAACTAAGTGGAGCCTAACCCAGTCATTGGGTTTGGAATTTGGATCTGATTATAGCACTAATTTACTGGGAGATGTAACTAAGAATGCTGGCCCAGACATTGTTCCTGAGATGTTCACTTTTAATGGTGAGTTGAAAGAGCAGTCTGTGCACCAAAACATCTCAGAGCAGTATACACATACACAATCTGAACCTGTAATGAAATCCAATTCTGAATATGAAGTGCCTGGTGAAGCAAGTATCAATTATGCCTTGACCATGAAGCGTGGATTATTGGATGGAGAGGAGAGTCTAAAGAAGGTTGATAGTTTCTCTAGGTGGATTACTAAAGAACTTGCAGGTGTGGATGATCTGCATATGCAGTCCTCCCCTGGTATTTCATGGAACACTGATGATTGTGGGGATGTGATAGATGATACATCGTTAAACCTGTCCCTTTCTCAAGACCAGCTGTTTAGCATAAACGATTTTTCACCTAAATGGGCTTATGCTGAATCAGAAATTGAGGTGTTGATTGTTGGAACATTTTTAAAGAGTGAACCTGTGGTGGCCGCATGTAACTGGTCCTGTATGTTTGGGGAAGTGGAGGTTCCTGCTGAGGTCTTAGCTAATGGAATTCTATGCTGTCAAGCTCCACCTCATAAGATTGGACGGGTTCCCTTCTATGTAACTTGTTCCAATAGGTTTGCTTGTAGTGAAGTTCGGGAATTTGAGTACAAAGAAGGCTTCAACAAAAATATAGATCTTACAGAATTTTTTAACAGTTCAACTGAAATGGTGCTTCATTTGCGACTGGTGGGGTTACTTTCTTTAAATTCAGTGCCCACATCAAAGCGAGTGTTTGAGGGTGATATGGAGAAAAGAAACTTAATTTTCAAGCTTATTTCACTGAAAGAGGAAGAAGAATATTCAAGTAAGGAAGATACAACTGTGGAGATGGATAACACAAAACACAAGTTGAAGGAGCATATGTTTCACAAGCAGGTTAAAGAGATGTTGTACTCATGGCTTCTTCACAAAGTAACTGAAACCGGTAAAGGGCCTCTTGTATTAGGTGAGCATGGGCAGGGTGTGTTACATTTAGTTGCTGCTCTTGGTTATGATTGGGCCATAAAACCAATCCTAACTGCTGGAGTCAATATCAACTTCCGTGATGTGAGTGGATGGACAGCTCTACACTGGGCTGCATTCTGTGGCCGAGAGCGAACAGTTGCCATCCTTGTCTCCATGAGGGCAGCCACTGTAGCATTGACAGATCCAAGTCCAGAATTTCCTTCGGGTAGAACACCTGCAGATCTTGCTTCTAGCAATGGCCACAAAGGAATTTCCGGTTTTCTTGCAGAATCATTATTAACTAGCCATCTTGAATCACTCACAATGGATGAAAATAAAAATGGTAGGAAAGAAACTTCAGGAATTAAAGTAGTGCAAACAGCTTCAGAGCGAACTGCGATACCTGTGCTTTATGGTGATATACCAGATGCTATCTGCCTTAAGGATTCTCTTAATGCTGTCCGGAATGCTACACAAGCTGCTGATCGTATACATCAAGTATACAGAATGCAGTCATTTCAGAGGAAGCAGTTAGCTCAGTATGATGATGATGAAGAATTTGGATTGTCAGATCAACAAGCTCTTTCCCTTCTAGCTTCTAGAATGAGAAAATCCGGACAAGTAGAGGGTTTAGCCAATGCTGCTGCAATACAGATACAGAAAAAGTTCCGGGGTTGGAAGAAGAGAAGAGAATTCTTGATCATTCGTCAAAGAATTGTTAAAATCCAGGCCCATGTAAGAGGTCACCAGGTCAGAAAGCAGTATAAATCAGTCATATGGTCCGTAGGAATCCTGGAAAAGGTCATATTACGCTGGAGGCGCAAGGGCAGTGGTTTACGTGGATTTCGACCGGATACCCTGAACAAGGTCCCTGATCAACCAAGCGAATCTCTGAAAGAGGATGATTATGATTATCTCAAAGAAGGAAGGAAACAAAGTGAAGCAAGGTTCCAAAAGGCCCTTTCACGGGTGAAATCCATGGTTCAGTATCCAGAGGCACGGGCTCAATACCGACGGGTGCTAAATGTAGTTGAGGACTTCCGTCAAAACAAGGGAGATAATTTGAATTTGATGAATTCGGAACAGACAGTTGATGGTGTGGAGGATTTGATTGATATTGACATGCTTTTAGATGATGAAAATTTCTTGCCTGAAAACGTCACTGATGCTAAGATCGCAAAGTTTAAGCATATTAGGAGGCTCAATCATTCTTGTGATCTGGGTAAAATACATGCCCCCTTCATCCGCAGAGTTACCATGAGAGACTTGTCTTGA 3567 0.4211 MAERASYGLGPRLDLQQLQLEAQHRWLRPAEICEILCNYRMFQITSEPPNRPPSGSLFLFDRKVLRWEVLMCYTATMPMEKKVKIFRGEAIGCLNRECDVLVYIPLAVFKLEVNKTNVGGKTYSGESTSDSQKGSSLSSGFPRNYGSVPSGSTDSLSPTSTLTSLCEDADSVFCPFGLNGLIKLFLEDIHQASSGLQSYQESQSLGNDRLMDKIDARSNSSHLMHPFSGDHGQLPVSGAEYIPLVQGGKSRGSDTTYIEGHRAHGIASCDNAMEQSAGKHPDPSLVSSTAIISSASGSILEENNIVSGNLLERINALTEEERGPQPIHSNWQHKDEETKVIAIMVEQHHAAPPWTVMSSCDVFHALEHLHLLASDLHFWNTFLLPHFSQPLLYNIKLDCLMGYMIPLEGDTGELTKWSLTQSLGLEFGSDYSTNLLGDVTKNAGPDIVPEMFTFNGELKEQSVHQNISEQYTHTQSEPVMKSNSEYEVPGEASINYALTMKRGLLDGEESLKKVDSFSRWITKELAGVDDLHMQSSPGISWNTDDCGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSEPVVAACNWSCMFGEVEVPAEVLANGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYKEGFNKNIDLTEFFNSSTEMVLHLRLVGLLSLNSVPTSKRVFEGDMEKRNLIFKLISLKEEEEYSSKEDTTVEMDNTKHKLKEHMFHKQVKEMLYSWLLHKVTETGKGPLVLGEHGQGVLHLVAALGYDWAIKPILTAGVNINFRDVSGWTALHWAAFCGRERTVAILVSMRAATVALTDPSPEFPSGRTPADLASSNGHKGISGFLAESLLTSHLESLTMDENKNGRKETSGIKVVQTASERTAIPVLYGDIPDAICLKDSLNAVRNATQAADRIHQVYRMQSFQRKQLAQYDDDEEFGLSDQQALSLLASRMRKSGQVEGLANAAAIQIQKKFRGWKKRREFLIIRQRIVKIQAHVRGHQVRKQYKSVIWSVGILEKVILRWRRKGSGLRGFRPDTLNKVPDQPSESLKEDDYDYLKEGRKQSEARFQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQNKGDNLNLMNSEQTVDGVEDLIDIDMLLDDENFLPENVTDAKIAKFKHIRRLNHSCDLGKIHAPFIRRVTMRDLS 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00365 1188 SMART ANK_2a 767 796 IPR002110 GO:0005515
Spst3g00365 1188 SMART ANK_2a 800 830 IPR002110 GO:0005515
Spst3g00365 1188 SMART ANK_2a 839 868 IPR002110 GO:0005515
Spst3g00365 1188 SMART iq_5 975 997 IPR000048 GO:0005515
Spst3g00365 1188 SMART iq_5 998 1020 IPR000048 GO:0005515
Spst3g00365 1188 FunFam Calmodulin-binding transcription activator 2 975 1023 - -
Spst3g00365 1188 SUPERFAMILY Ankyrin repeat 761 861 IPR036770 -
Spst3g00365 1188 Gene3D - 711 862 IPR036770 -
Spst3g00365 1188 Gene3D Immunoglobulins 560 655 IPR013783 -
Spst3g00365 1188 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 67 - -
Spst3g00365 1188 ProSiteProfiles IQ motif profile. 999 1023 IPR000048 GO:0005515
Spst3g00365 1188 MobiDBLite consensus disorder prediction 120 160 - -
Spst3g00365 1188 Pfam CG-1 domain 21 67 IPR005559 GO:0003677
Spst3g00365 1188 ProSiteProfiles IQ motif profile. 976 1005 IPR000048 GO:0005515
Spst3g00365 1188 Pfam IPT/TIG domain 567 652 IPR002909 -
Spst3g00365 1188 Pfam IQ calmodulin-binding motif 1001 1020 IPR000048 GO:0005515
Spst3g00365 1188 Pfam IQ calmodulin-binding motif 978 996 IPR000048 GO:0005515
Spst3g00365 1188 Gene3D - 976 1022 - -
Spst3g00365 1188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 975 1025 IPR027417 -
Spst3g00365 1188 Pfam Ankyrin repeats (3 copies) 772 860 IPR002110 GO:0005515
Spst3g00365 1188 SUPERFAMILY E set domains 567 652 IPR014756 -
Spst3g00365 1188 ProSiteProfiles CG-1 DNA-binding domain profile. 15 67 IPR005559 GO:0003677
Spst3g00365 1188 FunFam Calmodulin-binding transcription activator 2 560 656 - -
Spst3g00365 1188 SMART CG_1_2 18 107 IPR005559 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00365 Spst-Chr3 6441234 6453003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00365 1 338 CAMTA Transcription Factor Family AT5G64220 31.680 2.58e-31 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Spst3g00365 Ank_2 3.1e-06 CL0465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00365 K21596 - gmx:100795682 1276.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00365 3 6441234 6453003 Spst6g01701 6 16212914 16224024 PCT