Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00362 ATGGATTCTGCCTTCTCCGTTACCACCACGGCGCATATAGCGCTTTGCAGAGCGCTCCACCGTCATTTTGCTGGAGCTCCTCAACGCGCCTTCGTCCGCCGCAACCTCAAATGCATAGTTGCTTCCTACAACAACCGCTGCCGCATTCCGTGTTCATTCGCTTCCACGCCATCGCGGTCCTCACTCCGCTGCTTCCGCGTACTGCTCCCGAGAACGCCATGCCGACTGCGCTGCATTTCGAGCTCCGCCACTTCCTATGCTTCTTCCACCGGTGGTGGAAATGGCAGCGGTGGAACTGGTGACGGCAGCGGAGATGGCGGTTTTGGCGGTGAGTCTGGTGATGCTGGTCTCCAATTGGTTGGAGACTTGTCACAGGAGCTTTCGGCACTTTCTCCTGACGTTATCATTCTCGATGTTTCAGGAATGGTGTGCGGGGGATGTGCCGCGACTGTGAAAAGGATACTGGAAAATCGAGTATCATCTGCTAGTGTAAATTTAACAACAGAGACAGCAATCGTTTGGCCTGTATCCGAAGCAAAAAATGCACCAAATTGGCAAAGACAATTAGGGGAGGCACTTGCAGAGCATTTAACTAGCTGTGGTTACAATTCTAGCCTCCGAGATTCTACAAGAGACAATTTCCTCCAAATTTTTGAAAGGAAGATGGAGGAAAGACAAAGACAATTAAGAGAAAGTGGTCGTGAGCTAGCTGTTTCGTTGGCTCTATGTGCTGCTTGTCTAGTTGGCCATTTCTCTCATTTCTTTGCAGCAAAGGCACCATGGGTCCATGTATTTCATTCCATTGGGTTTCATCTATCCATATCTTTGTTTACATTGCTTGGTCCTGGCCGCCAACTAATCCTTGATGGCTTAAAAAGCCTTCTTAAACGGACACCAAACATGAACACCTTAGTTGGTCTTGGGGCTTTATCGTCATTTACAGTCAGTTCATTTGCTGCCTTATTGCCAAAATTGGGATGGAAGGCTTTCTTTGAGGAGCCAATTATGCTAATTGCATTTGTCTTGTTAGGTAGGAATCTTGAACAGAGAGCTAAACTCAAAGCAACCAGTGATATGACAGGACTTCTTAGTTTATTGCCACCAAAAGCTCGCCTTCTAGTTAACAATGGGGAAACAGAGCCTGGCTCGGTTGTTGAAGTTCCTTCTGACAGTCTTTCGGTTGGAGACCAAATTATTGTGTTGCCTGGAGACCGAATTCCGGCTGATGGAGTTGTGAGAGCTGGTAGAAGCACTATTGATGAATCAAGTTTCACTGGTGAACCACTACCTGTAACAAAAGTACCTGGGAGTGAGGTAGCAGCTGGAAGTATAAATCTTAATGGAACTCTTACAATGGAAGTGCAAAGACCAGGTGGCGAAACTTCTATGGCAAACATTGTTCGTCTAGTTGAAGAGGCACAAAGTAGGGAAGCTCCTGTACAACGGTTGGCTGACAAGAAACCGCAGATGGTGCATGGAGAGGATTCAGGGCCAGCAACTGGGCAGGTTGGCTGTCACACTGTGAGCGCACCAGATCCAGAGCTTGTCAGAACAAATGATGATGACAAACAGCAGCCAACGGTGGCTGGACACTTCACTTATGGAGTGATGGCAGCCTCTGCTGCCACATTCACATTCTGGAGTCTGTACGGCACCCACATTTTGCCTACTGGTTTATATCAAGGAAGTTCAGTTTCACTGGCTCTGCAGCTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTAGCCACACCTACTGCAGTGCTGGTTGGAACTTCTTTGGGGGCTAAAAGAGGATTACTTGTACGTGGTGGAAATATTCTAGAGAAGTTTGCAATGGTAAACACTGTTGTGTTTGACAAAACAGGGACCCTCACGATTGGTAGACCTGTTGTGACAAACATTGTCACTCCAACATGCATTAAAAATGGAATTTCAAGTTTTCATCTACACAAGATTTCCATTTTCCAGAAGTATAGAATCAACTCTGGTTTCGAACAACTAGATGGGTTAGAGGAAAAAGCTTAG 2040 0.4686 MDSAFSVTTTAHIALCRALHRHFAGAPQRAFVRRNLKCIVASYNNRCRIPCSFASTPSRSSLRCFRVLLPRTPCRLRCISSSATSYASSTGGGNGSGGTGDGSGDGGFGGESGDAGLQLVGDLSQELSALSPDVIILDVSGMVCGGCAATVKRILENRVSSASVNLTTETAIVWPVSEAKNAPNWQRQLGEALAEHLTSCGYNSSLRDSTRDNFLQIFERKMEERQRQLRESGRELAVSLALCAACLVGHFSHFFAAKAPWVHVFHSIGFHLSISLFTLLGPGRQLILDGLKSLLKRTPNMNTLVGLGALSSFTVSSFAALLPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKLKATSDMTGLLSLLPPKARLLVNNGETEPGSVVEVPSDSLSVGDQIIVLPGDRIPADGVVRAGRSTIDESSFTGEPLPVTKVPGSEVAAGSINLNGTLTMEVQRPGGETSMANIVRLVEEAQSREAPVQRLADKKPQMVHGEDSGPATGQVGCHTVSAPDPELVRTNDDDKQQPTVAGHFTYGVMAASAATFTFWSLYGTHILPTGLYQGSSVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLVRGGNILEKFAMVNTVVFDKTGTLTIGRPVVTNIVTPTCIKNGISSFHLHKISIFQKYRINSGFEQLDGLEEKA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00362 679 ProSitePatterns E1-E2 ATPases phosphorylation site. 624 630 IPR018303 -
Spst3g00362 679 Pfam E1-E2 ATPase 365 486 - -
Spst3g00362 679 Pfam E1-E2 ATPase 528 602 - -
Spst3g00362 679 FunFam Copper-transporting ATPase PAA1, chloroplastic 133 206 - -
Spst3g00362 679 PANTHER ATP7, ISOFORM B 128 646 - -
Spst3g00362 679 MobiDBLite consensus disorder prediction 477 511 - -
Spst3g00362 679 Pfam Heavy-metal-associated domain 137 202 IPR006121 GO:0046872
Spst3g00362 679 Gene3D - 352 474 - -
Spst3g00362 679 Gene3D - 519 634 - -
Spst3g00362 679 SUPERFAMILY Calcium ATPase, transmembrane domain M 335 640 IPR023298 -
Spst3g00362 679 Coils Coil 215 235 - -
Spst3g00362 679 Gene3D - 134 209 - -
Spst3g00362 679 MobiDBLite consensus disorder prediction 84 108 - -
Spst3g00362 679 FunFam Copper-transporting ATPase 1, putative 352 474 - -
Spst3g00362 679 SUPERFAMILY HMA, heavy metal-associated domain 135 205 IPR036163 GO:0046872
Spst3g00362 679 CDD HMA 137 202 IPR006121 GO:0046872
Spst3g00362 679 SUPERFAMILY Calcium ATPase, transduction domain A 381 470 IPR008250 -
Spst3g00362 679 MobiDBLite consensus disorder prediction 478 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00362 Spst-Chr3 6373365 6393636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00362 292 638 Primary Pumps ATPases AT1G63440 38.136 3.58e-59 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00362 K17686 - gmx:100777857 992.645