Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00361 ATGGCCTTGCTAAGGCTCGCAGCTGCAGTAGAATCAAATTCCGTACATCCAGTCGGGAAAGCAATTGTGGACGCTGCTCAAGCTCTTAATTGTCATAATGCTAAGGTTCTCATCAGTATTTTAGTTGTCAGGCTGATTAAACAGGTAATAGATGGAACCTTCCTGGAAGAACCTGGATCTGGCGCAGTGGCAACAATTGATGATAAAAAGGTTTCTGTGGGTACATTGGAATGGATCACCAGGCATGGAGTTGTTAACAGTTTACATCAAGAAGTGGATAAGTTTAATAACCAATCCTTTGTCTATGTTGGAATTGGTGATACTATAGCTGGCCTAATTTATTTTGAAGATGAGATAAGGGAAGATGCTAGAGACGTTGTTGAGAAATTGTCAAAGCAAAATATAGGTGTATATATGCTATCAGGAGACAAGAGGAATGCTGCGGAGCATGTTGCTTCTCTTGTTGGAATTCCCAAAGAGAAGGTGCTATCTGAAGTGAAACCAGCTGAGAAAAAAACGTTCATAAAGGAACTACAGAAGGATAAGAACATTGTAGCTATGGTTGGTGATGGAATTAACGATGCAGCTGCCCTGGCCTCTTCACATGTTGGTATTGCATTAAGTGGAGGTGTCGGGGCTGCTAGTGAGGTGTCTTCAATTGTACTAATGCGCAACCAGCTCTCACAGCTAGTTGATGCCTTGGAGCTTAGCAGGCTGACCATGAATACTGTAAAACAGAATCTTTGGTGGGCTTTCATATACAACATTGTAGGAATTCCAATTGCTGCTGGAGCGTTATTTCCCATAAATGGAACTGTACTGACTCCATCAATTGCAGGGGCTCTCATGGGGCTGAGTTCAATTGGTGTAATGACAAACTCATTACTTTTGAGATTCAAATTTTCATCAAAGCAGAAACAAATATCGAGATCATCGCCAAACACCAAAATACATGTGGAGGATTCTGATATGGTACAACAAAACAAGAAAACAAACCGACATTTTTAG 1008 0.4107 MALLRLAAAVESNSVHPVGKAIVDAAQALNCHNAKVLISILVVRLIKQVIDGTFLEEPGSGAVATIDDKKVSVGTLEWITRHGVVNSLHQEVDKFNNQSFVYVGIGDTIAGLIYFEDEIREDARDVVEKLSKQNIGVYMLSGDKRNAAEHVASLVGIPKEKVLSEVKPAEKKTFIKELQKDKNIVAMVGDGINDAAALASSHVGIALSGGVGAASEVSSIVLMRNQLSQLVDALELSRLTMNTVKQNLWWAFIYNIVGIPIAAGALFPINGTVLTPSIAGALMGLSSIGVMTNSLLLRFKFSSKQKQISRSSPNTKIHVEDSDMVQQNKKTNRHF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00361 335 Pfam haloacid dehalogenase-like hydrolase 4 200 - -
Spst3g00361 335 Gene3D - 1 96 IPR023299 GO:0000166
Spst3g00361 335 PRINTS P-type cation-transporting ATPase superfamily signature 211 223 - -
Spst3g00361 335 PRINTS P-type cation-transporting ATPase superfamily signature 133 143 - -
Spst3g00361 335 PRINTS P-type cation-transporting ATPase superfamily signature 188 207 - -
Spst3g00361 335 PRINTS P-type cation-transporting ATPase superfamily signature 111 122 - -
Spst3g00361 335 SUPERFAMILY HAD-like 85 295 IPR036412 -
Spst3g00361 335 Gene3D - 103 255 IPR023214 -
Spst3g00361 335 FunFam Copper-transporting ATPase PAA1 chloroplastic 104 255 - -
Spst3g00361 335 NCBIfam HAD-IC family P-type ATPase 60 267 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Spst3g00361 335 PANTHER ATP7, ISOFORM B 3 299 - -
Spst3g00361 335 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 3 121 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00361 Spst-Chr3 6360314 6364981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00361 3 298 Primary Pumps ATPases AT1G63440 36.333 1.06e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00361 K17686 - gmx:100796210 542.347