Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00345 ATGGCAGTTGCAACATCTGGTGCTGTGTTGAACAGGTTTGGATCTCACTTCTTATGTGGAGGAAAGAGGAGTCAGGCACTGCTTGCTGCTGGCACTGGAGCAAAAGTTGGTGCTGCTGTTACTCCTAAAAGAGTTATTGTGGCAGTTGCTGCTGCACCAAAGAAGTCATGGATCCCTGCTGTAAAAAGTGGTGGGAATTTCATTGACCCAGAATGGCTTGATGGCTCGCTACCAGGTGACTATGGTTTTGACCCTCTAGGACTAGGGAAGGACCCAGCATTCCTCAAATGGTATAGAGAAGCTGAACTCATTCATGGGAGGTGGGCGATGGCTGCAGTTGTAGGCATCTTCATTGGGCAAGCGTGGAGTGGAGTTCCATGGTTTGAGGCTGGAGCTGATCCTAATGCAATTGCTCCTTTTTCGTTTGGTTCTCTTTTGGGTACCCAGTTGCTTCTAATGGGATGGGTTGAGAGCAAGAGATGGGTGGACTTCTTCAACCAAGATTCTCAGTCAGTGGAATGGGCCACCCCATGGTCAAGAACTGCTGAGAACTTCGGCAACTCTACTGGTGATCAAGGCTACCCTGGGGGCAAATTCTTTGACCCTTTGGGATTTGCTGGGACAATCAAGGGCGGTGTTTACATTCCAGATGCAGAAAAGCTAGAGAGACTGAAATTGGCTGAGATTAAGCATGCTAGGATTGCAATGTTGGCTATGCTGATTTTCTACTTTGAGGCTGGACAGGCCAAGACACCCATTGGTGCTCTTGGCTTGTAA 777 0.4852 MAVATSGAVLNRFGSHFLCGGKRSQALLAAGTGAKVGAAVTPKRVIVAVAAAPKKSWIPAVKSGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNQDSQSVEWATPWSRTAENFGNSTGDQGYPGGKFFDPLGFAGTIKGGVYIPDAEKLERLKLAEIKHARIAMLAMLIFYFEAGQAKTPIGALGL 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00345 258 Pfam Chlorophyll A-B binding protein 70 246 IPR022796 -
Spst3g00345 258 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 63 253 IPR001344 GO:0009765|GO:0016020
Spst3g00345 258 SUPERFAMILY Chlorophyll a-b binding protein 66 256 - -
Spst3g00345 258 Gene3D Chlorophyll a/b binding protein domain 70 256 - -
Spst3g00345 258 FunFam Chlorophyll a-b binding protein, chloroplastic 70 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00345 Spst-Chr3 6197601 6198781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00345 1 258 Chloroplast and Mitochondria Gene Families AT1G15820 79.070 6.74e-149 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00345 K08917 - gmx:100783223 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00345 3 6197601 6198781 Spst6g01711 6 16307670 16308797 PCT