Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00332 ATGACAGGCATGGCACAACTACAACATAGAAATTTGCTGCAACTACAGCATAGGAAGCAGGATGAACTCCTCATTGTTTACAACTATCTACCTAATGGAAGCATTGACAAGCTTCTGTTCGAAAATGATCATCAAAAGAAGAAATTACTAACTTGGGATTATAAGATTATTACTGGAATTGCCCAAGGGCCGCTGTATCTCCAAGAAGAATGCGAGCTGCAGGTTGTTGACAGAGATGTAAAGGCAAACAATGTTCTGATAGATGCAAATCTCCAACCAAAGCTTGGTAATTTTGGTCTTGCAAGGACTTACGAGCATGGAATCCATCCACAGATAATAAGCGTTGTGAAACACTAG 357 0.4006 MTGMAQLQHRNLLQLQHRKQDELLIVYNYLPNGSIDKLLFENDHQKKKLLTWDYKIITGIAQGPLYLQEECELQVVDRDVKANNVLIDANLQPKLGNFGLARTYEHGIHPQIISVVKH 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00332 118 FunFam Os07g0541700 protein 30 116 - -
Spst3g00332 118 SUPERFAMILY Protein kinase-like (PK-like) 4 109 IPR011009 -
Spst3g00332 118 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Spst3g00332 118 PANTHER - 4 107 - -
Spst3g00332 118 Pfam Protein tyrosine and serine/threonine kinase 4 105 IPR001245 GO:0004672|GO:0006468
Spst3g00332 118 ProSiteProfiles Protein kinase domain profile. 1 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00332 Spst-Chr3 6015784 6016140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00332 4 116 Receptor kinase-like Gene Family AT3G08870 48.718 2.30e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst3g00332 PK_Tyr_Ser-Thr 1.7e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00332 - - gmx:100801966 177.178