Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00323 ATGGCTTCTCTCGGCACTAGTAGCAATGAAATGCCGATTAACCATATTGAGATTCTCATACACTCTAATGATATAGAAGCAAAACCTAACCAAGAAATGGAAGAAAACAATATTGAGAACTCTCAAAGGGAACAGTGGCTTGGAGCAGCTGTGTTTGGAGTCAAAACTGGGTTGGCCTTAACCACCTTACTGATGATGGCCGTTGAAGCTTTGAATGAAGACATCATAGCCATGCTTCTAGCTGGTTTCTCAGGACTAGTTGCTGGGGCTTGGAGTATGCAAATTAAAGCGTTTGTATCGGTAGACACAGAGGTGGCTCAAATGAAAGTCCACCATATCAATCACAAGGAAGTGGATGAGGATGATAGACTTCTTAACCCGTTTCAAGCTTCCTTAGCATCAGCACTTGGATTTTCTATTGGTGTTATGGTGCCACTACTAGCAGCTGTTTTTATAAGGGACTATAAGATCAGGCTGCTAGTTATTTCTGTGGCTATCTTGGCATTGTTGGTATTTGGAGGGATAGGAGCAGTACTGGGTAAAAGTAAAACACCAGTGAGAAGGACTAGTGATAGTGGTGATTGGAGGTTGGATGACTATGGCTATTATATTTGGCTTTAA 621 0.4187 MASLGTSSNEMPINHIEILIHSNDIEAKPNQEMEENNIENSQREQWLGAAVFGVKTGLALTTLLMMAVEALNEDIIAMLLAGFSGLVAGAWSMQIKAFVSVDTEVAQMKVHHINHKEVDEDDRLLNPFQASLASALGFSIGVMVPLLAAVFIRDYKIRLLVISVAILALLVFGGIGAVLGKSKTPVRRTSDSGDWRLDDYGYYIWL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00323 206 Pfam VIT family 48 119 IPR008217 GO:0005384|GO:0030026
Spst3g00323 206 Pfam VIT family 117 186 IPR008217 GO:0005384|GO:0030026
Spst3g00323 206 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 187 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00323 Spst-Chr3 5924482 5925102 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00323 30 189 Nodulin-like Gene Family AT3G43660 48.214 1.08e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00323 K22736 - gmx:100527486 285.034