Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00321 ATGACCAACCTTGGAGCTAGAACTAATGGGATTTCATTAAACCAAGTTGAGATCCCTATCCATGCAAATGGTGTGGAGTCAAAACCGAGTGAAGAGAGCAGCATTGACTACTCTCAAAGGGGTCAGTGGCTTCGAGCAGCAGTGTTGGGAGCCAATGATGGGCTAGTCTCTGTTGCCTCACTTATGATGGGTATTGGAGCTGTTAAGAAAGAAATCAGTGCCATGCTTATTGCTGGTTTTGCTGGATTAGTTGCAGGGGCTTGTAGCATGGCGATTGGAGAGTTTGTGTCTGTATACACTCAGTATGAAATAGAGGTGACTCAGATTAAGAGGGAGAGGGAAGCTAATAACAATGGAGGAGTTGATGGAGAACCTCAAATGAAGAGGCTGCCGAACCCTTTTCAGGCTACACTAGCGTCAGCACTGGCCTTTTCTGTTGGTGCTTTGGTGCCAATGCTAGCAGCTGGATTTATAAGGAATCACAAGATTAGGATGGGAGTTATTGGTGCTGCAGTTAGCTTGGCATTGTTGGTGTTTGGAGGGGTAGGAGCAGTGCTTGGAAAAACTCCAGTGAAGAGATCTTGTCTCAGGGTGCTGATTGGAGGTTGGATGGCTATGGCCATAACATTTGGTCTCACCAAATTGGTTGGCTCTGCTGAACTTTGA 666 0.464 MTNLGARTNGISLNQVEIPIHANGVESKPSEESSIDYSQRGQWLRAAVLGANDGLVSVASLMMGIGAVKKEISAMLIAGFAGLVAGACSMAIGEFVSVYTQYEIEVTQIKREREANNNGGVDGEPQMKRLPNPFQATLASALAFSVGALVPMLAAGFIRNHKIRMGVIGAAVSLALLVFGGVGAVLGKTPVKRSCLRVLIGGWMAMAITFGLTKLVGSAEL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00321 221 CDD Nodulin-21 42 190 - -
Spst3g00321 221 Pfam VIT family 44 118 IPR008217 GO:0005384|GO:0030026
Spst3g00321 221 Pfam VIT family 128 213 IPR008217 GO:0005384|GO:0030026
Spst3g00321 221 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 26 216 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00321 Spst-Chr3 5912366 5913031 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00321 25 218 Nodulin-like Gene Family AT3G43660 64.948 8.61e-90 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00321 K22736 - gmx:100802489 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00321 3 5912366 5913031 Spst3g00321 3 5912366 5913031 ECH