Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00320 ATGGCTACTGCTACACCCAATGGTTTGGTGCCACTCAACCATGTAGGAGCAGTACATCCAAGTCCAGCACACAAAATTGATGATGAGAAGCAAAAGGAACAAGTTACTGAAGATCATAGCAGCGTTAACTATTTACAAAGGGCTCAGTGGCTTCGTGCAGCGGTTTTAGGAGCCAATGATGGGTTGGTTTCAGTTTCTTCACTGATGATGGGTGTAGGAGCTGTTAAAAAAGATGCAAAGGCTATGCTGCTTGCTGGTTTTGCAGGGTTGGTTGCAGGGGCTTGTGGAATGGCAATAGGAGAGTTTGTTGCTGTGTATACTCAGTATGACGTTGAGGTTGGTCAAATAAAGAGAGATATGAACGTGAGTGTAGGAGGAGAAATGGACTTGGAGATGGAAATGGAGAGAAGAACATTACCTAATCCATTGCAAGCTACTTTGGCATCTGCAATATCCTTTTCTATAGGTGCATTGGTACCTCTACTTTCAGCTGCTTTCATAGAAAGTTACAGGACAAGGGTTTCTATGGTTGTGGCAATGGCTAGCTTGGCTTTGGCGGTTTTTGGAAAGGTGGTGGCTCAACTGGGAAAAACTCATTCCATAAAATCTTGTGGAAGGTTCCTAGTTGGAGGATGGATAGCCATGGCCATCACTTTTGGTTTAACCAAATTACTGGGTGCTAGTGCTTTAGAATAA 696 0.4368 MATATPNGLVPLNHVGAVHPSPAHKIDDEKQKEQVTEDHSSVNYLQRAQWLRAAVLGANDGLVSVSSLMMGVGAVKKDAKAMLLAGFAGLVAGACGMAIGEFVAVYTQYDVEVGQIKRDMNVSVGGEMDLEMEMERRTLPNPLQATLASAISFSIGALVPLLSAAFIESYRTRVSMVVAMASLALAVFGKVVAQLGKTHSIKSCGRFLVGGWIAMAITFGLTKLLGASALE 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00320 231 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 28 225 IPR008217 GO:0005384|GO:0030026
Spst3g00320 231 CDD Nodulin-21 49 198 - -
Spst3g00320 231 Pfam VIT family 131 222 IPR008217 GO:0005384|GO:0030026
Spst3g00320 231 Pfam VIT family 51 118 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00320 Spst-Chr3 5907640 5908335 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00320 25 230 Nodulin-like Gene Family AT3G43660 55.825 3.91e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00320 K22736 - gmx:547974 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00320 3 5907640 5908335 Spst3g00320 3 5907640 5908335 ECH