Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00316 ATGTTACTGGGCAAGTTGTGTTCCAAGGTCTTCTCTGTGGGTTATTTGGGTAAAATTTCTGATGCCCTAGTTCATTTAATATGGAATCTAAGCAAGAAATTATATGTTTCAGCCATGTTGAATCTCATCCCTGCTGTCACCTACTTCATGTCTGTTAGTCTCCGTCTTGAGAAGTCAAATCTTGGAACAGCAGGTGGGATGGCCAAGTTGGTGGGAACTTTAACAGGAGTTGGTGGTGCCATGATCCTCACGTTCTACAAAGGAAGAAAGATATGCCTCTGGTCAACACAAATTTCCTTGTTGCACCATGCACCATCACCACATGGTGCCCCCACAGGTTCTCTCTTGTGGGGTTGCATACTAGCCTTTGGAGCCGCTTTGAGCTACTCAGTGTGGCTGATAATCCAGGGAATCTTGGCCTCGGGAGTGTGTTACACCCTTTTAGCATGGTGTGTGCGCAGGAAGGGACCCTTATTTGCGTCTGCTTTTAGTCCTCTAATGCTGGTGATTGTGGCCCTTTCCGAGCAATTGGTATTACATGAATGTCTCAACGTTGGAAGTGTTATAGGATCAGTGTTGATTGTGGGGGGATTGTACCTGTTGTTGTGGGGCAAAAGCAAGGAAACAGAGACGAAGCGAAATGAGGTGTCCTCAGAAGACCTTGTTCAATGTGAAGCAATCCACGATACCAATCCATCTTTGGCATGCTGCCAAAGGGACGAACATCACAAGAACATCAAAAAGCAAAAACTAAAAAGGTGGGGAATGGGAAGATCAAACATTGATGTGTGA 792 0.4545 MLLGKLCSKVFSVGYLGKISDALVHLIWNLSKKLYVSAMLNLIPAVTYFMSVSLRLEKSNLGTAGGMAKLVGTLTGVGGAMILTFYKGRKICLWSTQISLLHHAPSPHGAPTGSLLWGCILAFGAALSYSVWLIIQGILASGVCYTLLAWCVRRKGPLFASAFSPLMLVIVALSEQLVLHECLNVGSVIGSVLIVGGLYLLLWGKSKETETKRNEVSSEDLVQCEAIHDTNPSLACCQRDEHHKNIKKQKLKRWGMGRSNIDV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00316 263 PANTHER WAT1-RELATED PROTEIN 135 213 IPR030184 GO:0016020|GO:0022857
Spst3g00316 263 Pfam EamA-like transporter family 131 202 IPR000620 GO:0016020
Spst3g00316 263 SUPERFAMILY Multidrug resistance efflux transporter EmrE 125 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00316 Spst-Chr3 5607412 5609613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00316 30 221 Nodulin-like Gene Family AT1G68170 34.252 1.86e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00316 - - gmx:100793109 281.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00316 3 5607412 5609613 Spst3g00316 3 5607412 5609613 ECH