Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00311 ATGGCGTCGTCGAAGGTTGTCTCGACGAATCCGGATCTGCCACGCGACTCTTCTATATCTCCCCTTTCCTCTCTTATTCTCTCCGATCTGCACCACCCCACCTCCATGGACGACCTCCTCAAGTCCATGACCCCCTCTGCCGCCAAGAGCGTGGACGACGTCTGGAAGGAGATCGTCGCCGGCGCCCACCCTCACCATCCCACCGCGGCCGCCGGAGACGACAATGGTGGTGCCACCGCCTCTGAGGGCTACGAGACCATTACCCTCGAGGATTTTCTCACCAAGGCCGGCGCAGTCAGAGAGGAAGACGTGAGAGGGGTTCTGCCCCCTTCTTCTTCCGCCTCCCTCCCCTTCCCCCTTCCTCTCCCCGCAGAAGGCTCCTCTTCCTCCATTGAACCCTTTGGAAACGGGGTTGCGCCCTCCAATTCGGTTCACAAGGGGAAGAGAAGGGTCGTCGATGAACCGGTAGACAAGGCTACCCTTCAGAAACAGAGGAGGATGATCAAGAATCGAGAATCAGCCGCAAGGTCCCGGGAACGCAAGCAGGCTTACACATCGGAGCTCGAGTATCTGGTTCAGCAACTGGAGCTAGAGAATGCCCGGTTAATAAATGAAGAGGCTGAGTTGAGAAGGCAGAGGAAAAAGCAGCTCCTTGAGTACATCATTCCAGTTGAGGTGATGCCTAAACCCAGAAAAAAACTTCGGAGAGTAAATTCAACACAATCATTGTGA 732 0.5574 MASSKVVSTNPDLPRDSSISPLSSLILSDLHHPTSMDDLLKSMTPSAAKSVDDVWKEIVAGAHPHHPTAAAGDDNGGATASEGYETITLEDFLTKAGAVREEDVRGVLPPSSSASLPFPLPLPAEGSSSSIEPFGNGVAPSNSVHKGKRRVVDEPVDKATLQKQRRMIKNRESAARSRERKQAYTSELEYLVQQLELENARLINEEAELRRQRKKQLLEYIIPVEVMPKPRKKLRRVNSTQSL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00311 243 Gene3D - 161 217 - -
Spst3g00311 243 MobiDBLite consensus disorder prediction 1 20 - -
Spst3g00311 243 SUPERFAMILY Leucine zipper domain 162 213 IPR046347 GO:0003700|GO:0006355
Spst3g00311 243 Coils Coil 185 219 - -
Spst3g00311 243 SMART brlzneu 158 222 IPR004827 GO:0003700|GO:0006355
Spst3g00311 243 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 165 180 IPR004827 GO:0003700|GO:0006355
Spst3g00311 243 CDD bZIP_plant_BZIP46 162 202 - -
Spst3g00311 243 Pfam bZIP transcription factor 159 215 IPR004827 GO:0003700|GO:0006355
Spst3g00311 243 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 160 212 IPR004827 GO:0003700|GO:0006355
Spst3g00311 243 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 238 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00311 Spst-Chr3 5526673 5528852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00311 49 241 bZIP Transcription Factor Family AT5G44080 41.905 3.12e-36 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst3g00311 bZIP_1 5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00311 K14432 - gmx:100101890 259.996