Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00297 ATGGGTAGAGGCCCAGAAAAGCACACAAACATGGAAATTGATCTCTCTTTGAAGATAGATTCTGATCATGAACAAAACGCACAAGTAGATGTGCAAGTGAAAGACTCTGACGAGGAAGAAATGGCACAGATTCCGGATAATAACAAGGAAGAAGTCCCTGAAGCTACAGCTGGTGAAATAGAAGATGATGCATCAGTGGTAGAGACATCTTTGCAAGATAACACAAAAACAAAAGAGTTAAGTGTCCTACAAATGGAGATGGAGAGCATGAAGGAGGAGAACAAAGTTCTGAGGAAAGTTGTAGAGCAAACAATGAAAGACTATTATGATCTGCAGATGAAATTCTCAGTTATCCAGGAAAACAATAAAAGAAAGGATCATGAAATTTCTCTCTCACTTCAAAACCTTTCGACCACCAACGGCGAAGGACCATCGAGAATTCTTGAGATCTTTAATAAGAAAATTCAAAGTGCTCCACCTCCTCCAAATACTGATGCTGATAGTTTAAGCGAGAGTGAATTGGGTTTATCACTGACCTTGCAACCAAGCACAAGTCAAAAAGAAAGTGATGTGGGAAACAAGGAAGACAGAAAAGATCAAGAATTGCCAAGTTTTGCATCAGTGCAGAGCAAACTACAGCGGACACATGAGTTACCCGGAATTACTACCCATGCTATCTCCCCTCCAAACAGAAAAGCTAGGGTTTCGGTTCGAGCAAGATGTGAAGCTGCCACAATGAATGATGGGTGCCAATGGAGAAAATATGGACAGAAAATTGCGAAGGGAAATCCATGTCCACGAGCCTATTATCGTTGCACTGTAGCTCCAGGTTGCCCGGTTAGAAAACAGGTGCAAAGATGCATAGATGACATGTCCATTCTTATTACAACCTATGAAGGGACACATAACCATCCACTCCCCGTGGGTGCAACTGCTATGGCTTCTACAGCTTCTGCAGCAGCTTCCTTCATGCTGCTAGATTCAAGCAACCCTATTTCGGATGGTGCCTCTAGTTTCACTCAAGCACCCCTTACTTACAACACCTTCCATCAAACTTCAAACTTTAGGAGCATAAACCCTAGTGATCCATCCAAAGGGATTGTTCTTGATCTCACTAGCAACCTCAGTGAACCACTACGTTTTTCTACTGGTAGCTCCTCCAATACCACAACTGATACTCGCTTTTCTTGGATGTCAAACAAATATCAAGGTGGTGGTGCAATGGCAGTGAACAACAATTTTCACAAGCCTAGAGCTGTGGATATTCACGATAGAATTTGGAAAGGAGAAGAAAGCAAGCCACTAGATGACAATGTGTCTGCAATTGCCTCAGATCCTAAGTTTAGGGTTGCTGTTGCTGCAGCCATAACATCTCTCATGAATAAAGAGAGTCACACTGCTACTCATCCTATAGGGACTTCCTTTGGTCCTAGGAGTGGCCAAAATGGTAGCTAG 1455 0.4268 MGRGPEKHTNMEIDLSLKIDSDHEQNAQVDVQVKDSDEEEMAQIPDNNKEEVPEATAGEIEDDASVVETSLQDNTKTKELSVLQMEMESMKEENKVLRKVVEQTMKDYYDLQMKFSVIQENNKRKDHEISLSLQNLSTTNGEGPSRILEIFNKKIQSAPPPPNTDADSLSESELGLSLTLQPSTSQKESDVGNKEDRKDQELPSFASVQSKLQRTHELPGITTHAISPPNRKARVSVRARCEAATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPISDGASSFTQAPLTYNTFHQTSNFRSINPSDPSKGIVLDLTSNLSEPLRFSTGSSSNTTTDTRFSWMSNKYQGGGAMAVNNNFHKPRAVDIHDRIWKGEESKPLDDNVSAIASDPKFRVAVAAAITSLMNKESHTATHPIGTSFGPRSGQNGS 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00297 484 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 44 463 IPR044810 GO:0003700
Spst3g00297 484 MobiDBLite consensus disorder prediction 463 484 - -
Spst3g00297 484 MobiDBLite consensus disorder prediction 155 231 - -
Spst3g00297 484 Coils Coil 80 107 - -
Spst3g00297 484 MobiDBLite consensus disorder prediction 35 55 - -
Spst3g00297 484 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g00297 484 FunFam probable WRKY transcription factor 31 231 308 - -
Spst3g00297 484 Gene3D WRKY domain 231 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g00297 484 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g00297 484 MobiDBLite consensus disorder prediction 35 62 - -
Spst3g00297 484 MobiDBLite consensus disorder prediction 157 188 - -
Spst3g00297 484 SUPERFAMILY WRKY DNA-binding domain 239 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g00297 484 MobiDBLite consensus disorder prediction 203 217 - -
Spst3g00297 484 Pfam WRKY DNA -binding domain 247 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00297 Spst-Chr3 5234762 5237083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00297 83 366 WRKY Transcription Factor Family AT1G68150 52.667 4.79e-86 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g00297 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00297 - - gmx:100820209 793.112