Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00296 ATGGACTGGAGGCGTCGAACCAAGAAGCAATCTCAGCCTCGGTTGGAGCGGCTCAACGCCAAAAAGGGCTTCAGTTACCAACCACCACCCTCTTCTCCCCCTCCTTCTTCCACCTCCTCTTCCTCCCATTTCGATCGCCAAACCAGCTTCCGCCTCTTCGGCATCGACGGCGAGTTCGACCTCATCTTCGAGACCTTGGGCCTCTCCGGCCCCGAAGACTTCTCCATCCCCACCGCTGACTGGGAGGCCCGCAAGGCCCGCGTCGCTGCCTCCAACGCCCCCGGGCCCACCCCTACCCCTCACGCGCTTCTCCACTCTTCGCCCGAGATCCACCCTCTTTCCGTTACTGCTACTTCTGGGCCTCCCCTCCGAGACGACGCCGTTTCCCCTTCCGTCTCCCTTCTAGGTTCCTCCCCTTGGTCCTCCGGGGATCATGACGCGGGTAGGGGTAGTGGCAGCAGATTGAGAAACGGAGAAAGGAGCATGCTTTTCACTGATTCCGGTTCCTTCACCACTTCCCATGATGATGACAGTGACATTGGCGGCGAGAGGGTTTGTTTGGTTTCTAACTCCGCCGCGGCGGATGAGCTGGTTGTGCCACATGTCTCCTCCTCCAATGAGTGGTTCCGACAGACTTTCTCCTCTTGGCAAAAAGGTCACGTCTTGGGAAAAGGGTCTTTCGGAACCGTCTATGAATGCTTCACTGATGAGGGATTCTTTTTTGCGGTAAAGGAGGTGTGTTTGCTGGATGAAGGTAGCCAAGGAAAACAGAGCGTTTTCCAACTTCAGCAGGAAATATCTCTTTTGAGTAAGTTTGAGCATAAAAACATAGTTCGATATTATGGCTCGCACAAGGACAAAAGTAAACTATATATCTTCCTTGAGCTTATGTCAAAAGGGTCATTAGCAAGTCTCTATCAAAAGTATCTTTTAAACGATTCTCAAGTTTCTGCATACACAAGGCAGATTTTATGTGGCTTGAAGTATCTTCATGATCATAATGTGGTCCACAGGGACATCAAGTGTGCTAATATACTAGTTGATGTAAGTGGGGCTGTCAAGCTTGCAGATTTTGGGTTGGCAAAGGCAACAAAATTTAATGATGTTAGGTCAAGCAAAGGCTCCCCATACTGGATGGCCCCTGAGGTTGTTAACTTAAATAGCGGAGGTGGTTATGGGCTGGCAGCAGATATATGGAGCTTAGGGTGTACAGTTTTGGAGATGTTGACGCGGCAGCCACCTTATTCTGACTTGGAAGGAATGCAAGCATTATTTCTGATTGGCAGGGGTAAACCTCCCCCTATTCCAGAGTATTTATCTAAGGATGCCCAAGATTTCATTCGTGAATGCTTACAAGTTAACCCAAATGAACGTCCAACTGCAGCTCAGCTATTGGATCATCCATTTCTAAGGAGAACATTACTGTCTCCCGTAAGTTTTGTTTCTCCCCAGAGCAAGATGTATCGGTTATATCTGTTGGAGTTGGACCTAAAAACTCTCAACTGGTTGGTTATGTCAATGAACTCATGTTTAGCCCAGAATGTTGATACCATGATGAAGATAGGAGGGCATGGATCATCAAGGTCCAACAGATTGTGCTTTATCCATGAGGCAGAAGCGCCCACCAGGACATTGCTACGGCCAAGTTCAGTTGTTGGTTACATGAAGCTGTCTGATGACTAG 1683 0.4908 MDWRRRTKKQSQPRLERLNAKKGFSYQPPPSSPPPSSTSSSSHFDRQTSFRLFGIDGEFDLIFETLGLSGPEDFSIPTADWEARKARVAASNAPGPTPTPHALLHSSPEIHPLSVTATSGPPLRDDAVSPSVSLLGSSPWSSGDHDAGRGSGSRLRNGERSMLFTDSGSFTTSHDDDSDIGGERVCLVSNSAAADELVVPHVSSSNEWFRQTFSSWQKGHVLGKGSFGTVYECFTDEGFFFAVKEVCLLDEGSQGKQSVFQLQQEISLLSKFEHKNIVRYYGSHKDKSKLYIFLELMSKGSLASLYQKYLLNDSQVSAYTRQILCGLKYLHDHNVVHRDIKCANILVDVSGAVKLADFGLAKATKFNDVRSSKGSPYWMAPEVVNLNSGGGYGLAADIWSLGCTVLEMLTRQPPYSDLEGMQALFLIGRGKPPPIPEYLSKDAQDFIRECLQVNPNERPTAAQLLDHPFLRRTLLSPVSFVSPQSKMYRLYLLELDLKTLNWLVMSMNSCLAQNVDTMMKIGGHGSSRSNRLCFIHEAEAPTRTLLRPSSVVGYMKLSDD 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00296 560 PRINTS Tyrosine kinase catalytic domain signature 396 418 IPR001245 GO:0004672|GO:0006468
Spst3g00296 560 PRINTS Tyrosine kinase catalytic domain signature 329 347 IPR001245 GO:0004672|GO:0006468
Spst3g00296 560 PRINTS Tyrosine kinase catalytic domain signature 294 307 IPR001245 GO:0004672|GO:0006468
Spst3g00296 560 PRINTS Tyrosine kinase catalytic domain signature 439 461 IPR001245 GO:0004672|GO:0006468
Spst3g00296 560 SMART serkin_6 216 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00296 560 Pfam Protein kinase domain 217 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00296 560 Gene3D Transferase(Phosphotransferase) domain 1 214 488 - -
Spst3g00296 560 ProSitePatterns Protein kinases ATP-binding region signature. 222 244 IPR017441 GO:0005524
Spst3g00296 560 MobiDBLite consensus disorder prediction 1 16 - -
Spst3g00296 560 MobiDBLite consensus disorder prediction 112 158 - -
Spst3g00296 560 FunFam Mitogen-activated protein kinase 1, putative, expressed 214 483 - -
Spst3g00296 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Spst3g00296 560 ProSiteProfiles Protein kinase domain profile. 216 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00296 560 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 50 474 - -
Spst3g00296 560 SUPERFAMILY Protein kinase-like (PK-like) 213 512 IPR011009 -
Spst3g00296 560 MobiDBLite consensus disorder prediction 87 106 - -
Spst3g00296 560 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00296 Spst-Chr3 5210205 5215022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00296 4 87 MAP Kinase Kinase Kinase AT4G08500 36.842 1.55e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst3g00296 Pkinase 2.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00296 - K13414 gmx:100820552 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00296 3 5210205 5215022 Spst6g01763 6 16834744 16838286 PCT