Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00293 ATGTTGATCCTCGTCTTCCTCTTCAAACGTTCACGGTTCCTCTTTCCTCTTCGGCGATTGTTAGAAGAATATAAGAAAGCTTGTTTGATGGAACAGTACGAGAAGGTTGAGAAGATAGGTGAAGGAGCCTACGGCGTCGTTTACAAGGCTCGTGACCGCATCACAAACGAGACCATCGCATTGAAGAAGATTCGCCTGGAGCAGGAGGATGAGGGGGTTCCGAGCACCGCCATTCGAGAGATTTCTCTCTTGAAAGAAATGCAGCACCGGAACATTGTTAGGTTGCAGGATGTAGTACACAGTGAGAAGCGTTTGTATCTGGTTTTTGAGTACCTTGACTTAGATCTAAAGAAACACATGGATTCATCTCCAGAATTTGCAAAAGATCCACGGCAAGTAAAAGTGTATGTTCCTTTACCAAATTCTATGTGGCATTGCTTACTCACTAATTCACTGAAGCTTGCAGATTTTGGACTGGCTAGGGCATTTGGAATTCCTGTTAGAACATTTACTCATGAGGTGGTAACACTATGGTATAGAGCTCCTGAAATTTTGCTTGGATCCCCTCATTATTCTACCCCAGTCGATATTTGGTCAGTGGGATGCATATTTGCAGAAATGGTAGATCAACAACCTCTTTTCCCTGGGGACTCTGAGATTGATGAATTGTTTAAAATATTCAGGCAAACTGAATATGTTGGGAAACCCCAACCTAGCACAATATGTGCCAACATTGGAAAATATGGAATAGTACTTTTAATCTTGGGTACGCCAAATGAAGAAACATGGCCTGGAGTGACATCATTGCCTGATTTTAAATCAGCCTTTCCCAAGTGGCAGCCTAAGGACCTAAAAACTGTGGTTCCAAATCTTGAGCCAGCCGGTCTTGATCTTCTTTCTCGGATGCTTCGCTTGGATCCCAGCAAAAGAATTACTGCCAGGAACGCTCTTGAGCATGAATACTTCAAAGACATTAAATTTGTTCCCTGA 990 0.4293 MLILVFLFKRSRFLFPLRRLLEEYKKACLMEQYEKVEKIGEGAYGVVYKARDRITNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHSEKRLYLVFEYLDLDLKKHMDSSPEFAKDPRQVKVYVPLPNSMWHCLLTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSPHYSTPVDIWSVGCIFAEMVDQQPLFPGDSEIDELFKIFRQTEYVGKPQPSTICANIGKYGIVLLILGTPNEETWPGVTSLPDFKSAFPKWQPKDLKTVVPNLEPAGLDLLSRMLRLDPSKRITARNALEHEYFKDIKFVP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00293 329 FunFam Cell division control protein 2 30 113 - -
Spst3g00293 329 PANTHER CELL DIVISION PROTEIN KINASE 148 322 - -
Spst3g00293 329 Gene3D Phosphorylase Kinase; domain 1 30 113 - -
Spst3g00293 329 ProSiteProfiles Protein kinase domain profile. 33 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00293 329 Pfam Protein kinase domain 150 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00293 329 Pfam Protein kinase domain 33 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00293 329 Gene3D Transferase(Phosphotransferase) domain 1 119 327 - -
Spst3g00293 329 SUPERFAMILY Protein kinase-like (PK-like) 28 325 IPR011009 -
Spst3g00293 329 ProSitePatterns Protein kinases ATP-binding region signature. 39 62 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00293 Spst-Chr3 5152273 5159531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00293 30 329 Core Cell Cycle Gene Families AT3G48750 70.533 5.35e-158 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Spst3g00293 Pkinase 1.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00293 K02206 - gmx:100127418 473.011