Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00289 ATGGACTTTGATGAAATATTCAAGTTTACTATTGTTGCAAGCCATCTCTGCAATGAATCAAAGAACCCCAATTGTGTAGAGTCATTCCCCAAAGTTGATCTTAGAAACCGCCCAAATATTGCACCACTTTATTTGTCCTTTGATTTCTTTTGGAAGTATTGCCCCTTGAGCATTATGTCTATTGATTTGTCCAACAACTCTATGAAGGGTGGTTTTCCAACCGATGTTTTCTGTTGCACCCAAATCCAGTCTCTTGATCTAAGTATCAATGCATTTTCTGGTGACATTCCAATTCAAAGCTTCTCTCCCTTGACCAACCTCACTTTTCTCAACCTCTCCTATAATTGTTTTTCAGAGAGTAAACTGTCTGATTCCCAATTCTTCAAAAGGTTTAATTCTTCTAGTTTTCTTCATTCTGGTGCTCTCTTGGACCAAAAAAGGTTTACACTGAAGGCTGTTGCCCTATTAGTTTGCTTTCCCACCCTTGTCATATTTATGGTAATTTGCTTGGTATGGCTTTGTTTCCAAAGGCCTGATTTTCTACCTAGTAAACTTCAAAGAGGTAGGAGGTTTACACCAGCAATTCTAAAGGCAGCAACTGATGGTTTTTCAAATAAGTATCTGGTGGGGATGAGTGATGTTGTTCACATTTACAAAGGGATCTTGAGAGATGGTACAGAAGTGAAAATTGAGATGTACTGGGATGACATACCGAGGGATAGTTACCGTAGATTTGTTGAGGAATGCAAGGTTCTGTGTAAGTTACACCACAAAAACCTTGTTAAAGTTCTGGGGTGGTGTAAGAGCAGAAAATTCAGGGCCATTATAACAGAATGGACAAGAGAAGAAAATGTTGAAATGTGGTTATCAGGATCAGGTCCACCATGGAATCATAGAGTGAAAGTGTTAATGGGGGTTGTAGAATGCATGCGTTATTTGCAGGAGGAATGGCCTGAAATCGACTATGAACTCGACACAAGTAGTCTTTTGCTGTCTGACAACATGGAACCGTTAATATCAAGGTTCAAAGTTGGAGATCACAACAACAATCAAAGAAAGATACATAGGTTTGGAATATTTCTGCTAGAGATGATACTAAATAAGAGGGTTCAAGAGGAGTTTGGAGGAGGTGATGCTGGATTTTTTACGTACATGAGTAGAACTCTTAATCTTGCAGATTTGCTACAGATGATTGATGAGAGAATGGAAATAAATGAAACAAATTTTCATCAAGTTAAACAGACACTGTCTCTAGGATCAATGTGCATAGACCAATCAAAAAGTGAGAAGCTAAGCTTGGCCCTCATACTTAACACTGTATCAAAAGCCTACAAGGCTAGCCTTGTTTTGCCATCTACAAATCATAGGATATTTCACAGGGAGAGATTTAAGGGAAACGTGCCTCTTAAAACCAATTAA 1419 0.3855 MDFDEIFKFTIVASHLCNESKNPNCVESFPKVDLRNRPNIAPLYLSFDFFWKYCPLSIMSIDLSNNSMKGGFPTDVFCCTQIQSLDLSINAFSGDIPIQSFSPLTNLTFLNLSYNCFSESKLSDSQFFKRFNSSSFLHSGALLDQKRFTLKAVALLVCFPTLVIFMVICLVWLCFQRPDFLPSKLQRGRRFTPAILKAATDGFSNKYLVGMSDVVHIYKGILRDGTEVKIEMYWDDIPRDSYRRFVEECKVLCKLHHKNLVKVLGWCKSRKFRAIITEWTREENVEMWLSGSGPPWNHRVKVLMGVVECMRYLQEEWPEIDYELDTSSLLLSDNMEPLISRFKVGDHNNNQRKIHRFGIFLLEMILNKRVQEEFGGGDAGFFTYMSRTLNLADLLQMIDERMEINETNFHQVKQTLSLGSMCIDQSKSEKLSLALILNTVSKAYKASLVLPSTNHRIFHRERFKGNVPLKTN 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00289 472 Gene3D Ribonuclease Inhibitor 13 147 IPR032675 -
Spst3g00289 472 Gene3D Phosphorylase Kinase; domain 1 179 279 - -
Spst3g00289 472 ProSiteProfiles Protein kinase domain profile. 203 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00289 472 SUPERFAMILY Protein kinase-like (PK-like) 181 440 IPR011009 -
Spst3g00289 472 SUPERFAMILY L domain-like 24 128 - -
Spst3g00289 472 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 56 130 - -
Spst3g00289 472 Pfam Protein tyrosine and serine/threonine kinase 216 336 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00289 Spst-Chr3 5088952 5090474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00289 58 342 Receptor kinase-like Gene Family AT5G46330 27.414 2.11e-22 99.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g00289 PK_Tyr_Ser-Thr 4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00289 - - gmx:100779045 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00289 3 5088952 5090474 Spst3g00289 3 5088952 5090474 ECH