Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00287 ATGGCATCGGACTGTGGAAACATAAAGGGTTTTTTCCGAGAGAAGAAATCCACCGCCGCAACCAAATCTCCCACTAAATATTCCAACAAATCTCCGAATGCCGCTGCCACTTTAGGCTCCACTGCGGCCCAACCACCGGCCCTCGTCTCCCACGGCGGAAAACCCGACCTCCAAGATGATAAACACAACGAGAAGAACGAGGCGCTGCTGAGGCAATTCGACGTGAACATGATGTATGGGCCTTGTATCGGTTTGACACGGCTGGAGCGGTGGGAGCGTGCTCAGAGCCTCGGTCTGAACCCTCCACCGGAAATCCAGAGCCTCTTGAAGAGCGGGAAAGTTAAGATGGAGTCCATGTGGAGTGGTCGCATTTAG 375 0.5387 MASDCGNIKGFFREKKSTAATKSPTKYSNKSPNAAATLGSTAAQPPALVSHGGKPDLQDDKHNEKNEALLRQFDVNMMYGPCIGLTRLERWERAQSLGLNPPPEIQSLLKSGKVKMESMWSGRI 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00287 124 MobiDBLite consensus disorder prediction 21 44 - -
Spst3g00287 124 Pfam DNA polymerase delta, subunit 4 21 113 IPR007218 GO:0000731|GO:0006260
Spst3g00287 124 MobiDBLite consensus disorder prediction 1 65 - -
Spst3g00287 124 PANTHER DNA POLYMERASE DELTA SUBUNIT 4 1 122 IPR007218 GO:0000731|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00287 Spst-Chr3 5080932 5081371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00287 1 124 Core DNA Replication Machinery Family AT1G09815 48.819 2.34e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00287 K03505 - gmx:100778329 145.976