Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00259 ATGCAAATCTCTCTCCTTTCTCTATCTGTTATAACTTCCATCCCCACTTTGCTCATCAAAAACTCTTGTCACAAAGTCTCTCTCTTTTGCATTTCCACAACCAATTTCCCTCCATTCCCAAACCCACTCTTCTCTGCAAAACTCTTCCTTCCTCCAAAGCCACCGTCTTTCCCTGCGTTCAATCGTTTTTCTATCTCTGAACCCTTAGAATCGGATACCATTATGGAGAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGAAAGAAGCCTCAATCACTGCCACCACTATGTCCCTTGCCAGAGCACGATGAAATGGTTCTTCCAATGACCCCGTCGCAATTCAAGGACCGTCTCATATTTGGTCCTGCTTGTGCTTCCCCGAGGAACCCTTCACCTTTAGCTGATGCCTTAACACTGCCCAACAATTCCCCAAAATGTTCCTCTTCTACCTCGGAGGACTATGTTGATTCCCAGCAACACCTGTCCTCTTGGCTCATTGACCCCAATTACTCGTGCCGAAAATCAAATCTTCATCGCTCCAAAACCGCGCCGGCCATGGCGGTGATCAGCGACGTCAACCCCCAATCCTCCGTGCCAAAGCCGCAATTTGGCAGCCAGAGTATTGTGCGCCAGGGTGTAATTCTTCTTATTCTTTATTTGGCATTAGGGATTGTCATTTATTGGTTCAATCGTCATAATTTTTTAGCTTCCGAGACTCATCCTATAGTTGATGCATTATATTTTTGTATAGTCACAATGTGCACAATAGGGTATGGTGATATCACTCCGAATAGTACAGCCACCAAACTTTTCTCTATATTGTTTGTGTTGGTGGGGTTTGGATTTATAGACATATTGTTGAGTGGGATGGTCAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGGAGGAGGGGTGAGAAGGATGGGAAGTCCTATATAATTGATGTGAAGAAAGGGAGGATGAGGATTCGATTGAAGGTGGCGCTGGCGTTGGGAGTGGTGGTGATTTGTATTGGGGTAGGTGTGGCGGTTATGCATTTTGTGGAGAAGCTTGGATGGTTGGACTCTTTTTATCTCTCAGTTATGTCAGTTACAACGGTTGGGTATGGAGACCATGCATTCAAGACCATGCATGGCCGGATATTTGCTGCAATTTGGTTGCTCGTTTCAACGCTTGCGGTGGCTCGAGCGTTCCTCTATTTGGCTGAGGCAAGAGTGGATAAGCGGCATAGGATGATGGCTAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATTGATAACAATGGCTTTGTGAGGTATGGACTTGATTCCACTAAAATGTATACTGAGGTTTACACCCCCCACCCCATGCATCATGGACCACTTTTTCAACCCATCAGTGGGCCTAAAGCTGTATATGGTGTCTTTGGTAAAGTGTATAGCTTGCATGCCTTCATAAATGGTGGATTAAACCATAAGAATGAGAAAGGGAAAATAAAAATGATTGTATTGAGTTTAAGCTTAGAGCCAGATGGCTATTCTATACATTATTCACTGCAGTGGGTTTTCAACCCCTGCACTGCTGTAATGTCCACCTACATGGAGTTAAGGGTCCATTTTGAGAGGTCTTTGGACCACTCCTCTCAATTTTATAATTCTGAAAAGGTACCATTACGGACTGATGGTAGATTTTGTGCTACTGTTGATGCTGCAAATTCCTTCTCCAGTAAGTATGCATGGAAAATTGGATGGATGTACTTAAGATAA 1785 0.4437 MQISLLSLSVITSIPTLLIKNSCHKVSLFCISTTNFPPFPNPLFSAKLFLPPKPPSFPAFNRFSISEPLESDTIMEKEPLLPYFSPRKKPQSLPPLCPLPEHDEMVLPMTPSQFKDRLIFGPACASPRNPSPLADALTLPNNSPKCSSSTSEDYVDSQQHLSSWLIDPNYSCRKSNLHRSKTAPAMAVISDVNPQSSVPKPQFGSQSIVRQGVILLILYLALGIVIYWFNRHNFLASETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVAVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVRYGLDSTKMYTEVYTPHPMHHGPLFQPISGPKAVYGVFGKVYSLHAFINGGLNHKNEKGKIKMIVLSLSLEPDGYSIHYSLQWVFNPCTAVMSTYMELRVHFERSLDHSSQFYNSEKVPLRTDGRFCATVDAANSFSSKYAWKIGWMYLR 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00259 594 Pfam Ion channel 214 294 IPR013099 -
Spst3g00259 594 Pfam Ion channel 339 408 IPR013099 -
Spst3g00259 594 FunFam Two-pore potassium channel 5 197 307 - -
Spst3g00259 594 SUPERFAMILY Voltage-gated potassium channels 323 427 - -
Spst3g00259 594 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 241 431 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst3g00259 594 Gene3D - 316 423 - -
Spst3g00259 594 PRINTS Two pore domain K+ channel signature 251 279 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst3g00259 594 PRINTS Two pore domain K+ channel signature 371 380 IPR003280 GO:0005267|GO:0016020|GO:0071805
Spst3g00259 594 Gene3D - 207 307 - -
Spst3g00259 594 SUPERFAMILY Voltage-gated potassium channels 209 294 - -
Spst3g00259 594 FunFam Two-pore potassium channel 3 316 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00259 Spst-Chr3 4649139 4651964 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00259 78 444 Ion Channels AT4G18160 62.730 2.31e-157 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00259 K05389 - gmx:100804249 657.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00259 3 4649139 4651964 Spst3g00259 3 4649139 4651964 ECH