Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00258 ATGTCTGTTGAACCTAAAGAACTTTACTACCAGGACCTTGTCCTAGACCACAACAATCAGCAGGGCACAGGAGGAGGATCTGACATGTACGAAAAGCACTTTTCCTCATCCTTAATCCCTGCAGGTTCAACACCATATGATTCGCAGCCCTTTGATCCCTCCTACATGAGCTTCACTGAGTGTTTGCAAGGGGGCATGGACTACAATTCTCTTGCAACTTCTTTCGGCCTCTCTCCTTCCTCATCAGAGGTTTTCTCATCTGTTGAAGGGAACCACAAGCCTGCAGAAGGAGGAGATGGAGGTGCTGGTTGTGGTGGTGGCAGTGAAACCCTTGCGACCCTTAACTCATCTATCTCTTCTTCATCTTCTGAAGCCGGGGCTGAAGAAGACTCAGGAAAGAGCAAAAAAGATAGGCAGGTGAAAGCAGAAGAAGGAGGAGGAGGAGAAAACTCTAAGAAAGGGAACAAGGATAAGAAGAAAGGAGAGAAGAAACAGAAGGAGCCAAGGTTTGCCTTCATGACCAAGAGTGAGGTCGATCACCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCTGTCAAGAATAGCCCTTACCCAAGGAGCTACTACAGGTGCACTACACAGAAGTGCACAGTGAAGAAACGCGTGGAGAGGTCATTTCAGGACCCAACCACTGTGATAACAACGTATGAAGGTCAGCACAACCATCCGGTCCCCACATCGCTGAGAGGGAATGCGGCCGCAGGAATGTTCACACCTTCTTTGCTCGCCACACCAACTCCACTCGCAGCCGGGTCAAACTTCCCTCAAGATCTCTTCCTTCACATGCACCATCACCACCCTCATCATCACATTCACAACACCCTCTTCACCACACAATCAACAAACTCTGTTGCTACTACTACCACTACTGTTACTACTGCTGCTGCTGGTGCTATTCCTCCCTCCATTTACTCTTCCTATAACGTTAACAACTCTCTTCTTCACAGCCAGTATCTTCCTTCTGAATATGGCCTCCTTCAAGACATAGTCCCCTCCATGTTTCACAACAAGACACACCACCAGAATTAA 1077 0.4773 MSVEPKELYYQDLVLDHNNQQGTGGGSDMYEKHFSSSLIPAGSTPYDSQPFDPSYMSFTECLQGGMDYNSLATSFGLSPSSSEVFSSVEGNHKPAEGGDGGAGCGGGSETLATLNSSISSSSSEAGAEEDSGKSKKDRQVKAEEGGGGENSKKGNKDKKKGEKKQKEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPTTVITTYEGQHNHPVPTSLRGNAAAGMFTPSLLATPTPLAAGSNFPQDLFLHMHHHHPHHHIHNTLFTTQSTNSVATTTTTVTTAAAGAIPPSIYSSYNVNNSLLHSQYLPSEYGLLQDIVPSMFHNKTHHQN 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00258 358 FunFam WRKY transcription factor 57 167 241 - -
Spst3g00258 358 ProSiteProfiles WRKY domain profile. 176 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g00258 358 SUPERFAMILY WRKY DNA-binding domain 173 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g00258 358 Gene3D WRKY domain 165 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
Spst3g00258 358 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 99 285 IPR044810 GO:0003700
Spst3g00258 358 MobiDBLite consensus disorder prediction 128 171 - -
Spst3g00258 358 MobiDBLite consensus disorder prediction 109 127 - -
Spst3g00258 358 SMART WRKY_cls 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Spst3g00258 358 MobiDBLite consensus disorder prediction 79 171 - -
Spst3g00258 358 Pfam WRKY DNA -binding domain 182 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00258 Spst-Chr3 4593128 4594719 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00258 51 350 WRKY Transcription Factor Family AT4G18170 49.508 3.43e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Spst3g00258 WRKY 1.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00258 - - gmx:100787050 495.352