Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00235 ATGTACAGGACGTGTGGTGGAAACAAGCAATGGTTGTTGATGTTGTTGTTTTTTTCATCTGGTTGTGTTCAACTGAATCTGAGAGAACAGAACATCCTCTGCTTCTTGGGTTTGTTTTTTTTCATCTGTCTTCAACTGAATCCGCGGAACAGAGAACCCCTCACCTCACTTCTCTTTAACCATTCAACTTTCGCCTTTGTTTTCGTGACTGACATGGCTGGAGGTGTTGTTCAGCAGTTACTGAGGAGGAAACTCCACCCTCAATTTATTAACTCTTCCTTGTTGTCACCCATTATAGCAAAGAAAGATGATGCTGGCTCTACTAGCAGTAGGTCCTTAAGAGCAGTTGCATTACTTGGAGCTGGTGTGTCAGGCTTTTTCGGTTTTTCTACAATGGCAGCAGCTGATGAAGCTGAGCATGGCTTGGCATGTCCAAGCTATCCATGGCCTCACAAGGGAATTCTTAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAAGTTTATACAGAAGTTTGTGCTTCCTGTCATTCTATGTCTTTGATATCATATCGTGATTTGGTTGGTGTTGCTTATACAGAAGAAGAGGTAAAGGCTATGGCAGCTGAGATTGAGGTGGCTGATGGCCCCAATGATGAGGGTGAGATGTTTACGCGCCCTGGTAAACTCAGTGACCGTTTTCCTCAGCCATATGCAAATGAAGCAGCTGCTAGATTTGCTAATGGAGGAGCTTATCCTCCAGATCTAAGTCTTATTACCAAAGCCCGTCACAATGGTCAGAATTATGTTTTTGCCCTTCTAACTGGTTATCGTGACCCTCCTGCCGGTGTTGCGATAAGGGAAGGACTTCATTATAATCCTTACTTTCCTGGTGGAGCAATTGCCATGCCTAAAATGCTTAATGATGGTGCTGTGGAATATGAAGATGGTACCCCTGCTACAGAAGCTCAGATGGGGAAAGATGTTGTGTCATTCTTAAGTTGGGCAGCCGAACCTGAGATGGAAGAGAGAAAACTGATGGGATTTAAATGGATATTTGTACTGTCACTGGCACTACTTCAGGCTGCCTATTACCGTCGTTTGAGGTGGTCAGTTCTAAAGTCTCGCAAGTTAGTTCTTGATGTTGTCAACTAG 1137 0.4398 MYRTCGGNKQWLLMLLFFSSGCVQLNLREQNILCFLGLFFFICLQLNPRNREPLTSLLFNHSTFAFVFVTDMAGGVVQQLLRRKLHPQFINSSLLSPIIAKKDDAGSTSSRSLRAVALLGAGVSGFFGFSTMAAADEAEHGLACPSYPWPHKGILSSYDHASIRRGHQVYTEVCASCHSMSLISYRDLVGVAYTEEEVKAMAAEIEVADGPNDEGEMFTRPGKLSDRFPQPYANEAAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVAIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLRWSVLKSRKLVLDVVN 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00235 378 ProSiteProfiles Cytochrome c family profile. 161 268 IPR009056 GO:0009055|GO:0020037
Spst3g00235 378 FunFam Cytochrome c1, heme protein, mitochondrial 334 378 - -
Spst3g00235 378 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 333 377 IPR021157 -
Spst3g00235 378 FunFam Cytochrome c1, heme protein 138 333 - -
Spst3g00235 378 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Spst3g00235 378 PRINTS Cytochrome C1 signature 167 186 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 147 166 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 245 269 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 294 313 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 333 348 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 283 294 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 212 232 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 PRINTS Cytochrome C1 signature 314 333 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 SUPERFAMILY Cytochrome c 142 332 IPR036909 GO:0009055|GO:0020037
Spst3g00235 378 PANTHER CYTOCHROME C1 105 376 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 Pfam Cytochrome C1 family 149 365 IPR002326 GO:0009055|GO:0020037
Spst3g00235 378 Gene3D - 334 377 - -
Spst3g00235 378 Gene3D - 138 333 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00235 Spst-Chr3 4109059 4113910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00235 72 378 Chloroplast and Mitochondria Gene Families AT3G27240 84.142 3.10e-179 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00235 K00413 - gmx:100777056 589.341