Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00220 ATGCAGACTCAGGAGTATATTCTCCCGGAGATGGTACTTCCTTTGGTAGATGAGTCCATTGATGCTCATGCTCATATGCATGCTCCACTTGCTTCTACCTTTGATTCGTTTTTACCTCCAAATGTGGGGCAGATAACACCCTTTGAAAGATTTAAATTGCAACCCTCTGAGGCTTGCCCCAAGAATTTTGTTATCTTTGATCAAACAGATCAGCAAAGCAGGATAATGTTCCATCCTGCAATGACTTACAAATTTAATAGTCCTGAATTTAATGTTCATGCTACTTGTTCTCAAGATTTTGAGAAGAATAAAGTCAATCAAATGGAAAGAGAATTGTCATCTCCTTTTGAAGAAGATCCCAACGACATTGATGCATTGTTGAGCATAGGAGTGGATGAACTTGAAGACATTGATGAGGAAGAAGTCAGCACGGCAAGGACTCATGAAAATTATGAAAGTTTGTCCGACACTTGCTCCAGTTATTGCTCAAAATCAAGGAAGAAGAGGCTGTCATCATCTTCTGTACACAAGTCTTCTGGGGGTAGGGGTTGCTGCCAAGATGATGGGAAAAATCGGGAGATAAAGAGGATGGTGAGGATGTTGAGAAAGATTGTGCCTGATGGAGGTAATCAAATGGACACTATTACTGTTTTGGATGAAGCTGTTAAATACCTCAAGTCTCTCAAAGTTGAGATGGAACAATTTGGAGTTGAACCATGA 720 0.4028 MQTQEYILPEMVLPLVDESIDAHAHMHAPLASTFDSFLPPNVGQITPFERFKLQPSEACPKNFVIFDQTDQQSRIMFHPAMTYKFNSPEFNVHATCSQDFEKNKVNQMERELSSPFEEDPNDIDALLSIGVDELEDIDEEEVSTARTHENYESLSDTCSSYCSKSRKKRLSSSSVHKSSGGRGCCQDDGKNREIKRMVRMLRKIVPDGGNQMDTITVLDEAVKYLKSLKVEMEQFGVEP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00220 239 PANTHER TRANSCRIPTION FACTOR BHLH145 12 238 IPR037546 -
Spst3g00220 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 193 234 IPR036638 GO:0046983
Spst3g00220 239 Gene3D - 191 236 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00220 25 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 41.597 3.66e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00220 - - vra:106768906 368.237