Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00214 ATGGCTGCGACTCTCACCACTGTAAGAAATCCCATTTTCCACACTCACCATTACCAACTCCACAAGCACTTCACAGCACCCTCTTCCTTACGCCTCCTCAATTTCGCAAAGATGGAAGGAAGTGAGATCGGTGAGCAAGTGGGGGAGGATTTCAGAACCAAGAAGAAAATTTTTGTTGCTGGAGCTACTGGTAGCACTGGGAAAAGAATCGTTGAGCAGTTACTGGCAAAGGGTTTTGCTGTTAAGGCTGGGGTTAGAGATTTGGCCAAGGCCAGGTCCACCCTTTCTTCTGCCAACCCATCTCTTCAAATTGTAAAAGCTGATGTCACAGAGGGGTCTGAAAAGATAGCTGAAGCCATTGGTGATGATTCAGAAGCTGTGGTATGTGCCACAGGGTTTCGGCCGGGGTGGGATTTGCTAGCTCCGTGGAAGGTTGACAATTTTGGTACTGTAAACCTTGTTGAAGCTTGCAGGAAACGTAATGTCAACAGATTCATTCTTGTCAGTTCTATTTTAGTTAATGGAGCATCCATGGGACAGCTACTCAATCCGGCTTACATCTTTCTTAATGTTTTTGGACTCACCTTAGTAGCAAAACTACAGGCAGAGAATTATATCAGGAAATCTGGTATAAACTACACAATTATAAGACCAGGCGGGTTGAGAAATGATCCTCCTACTGGCAATGTTGTTATGGAGCCAGAGGACACCCTTTATGAAGGTTCTATATCCAGAGATCAAGTTGCTGAAGTAGCTGTGGAGGCATTGGCTTATCCTGAGGCATCTTATAAAGTTGTGGAAATTGTGTCTCGCCCAGATGCTCCTAAGCGTTCATACCATGACCTTTTTGGTTCCATAAGCCATCGATGA 870 0.4494 MAATLTTVRNPIFHTHHYQLHKHFTAPSSLRLLNFAKMEGSEIGEQVGEDFRTKKKIFVAGATGSTGKRIVEQLLAKGFAVKAGVRDLAKARSTLSSANPSLQIVKADVTEGSEKIAEAIGDDSEAVVCATGFRPGWDLLAPWKVDNFGTVNLVEACRKRNVNRFILVSSILVNGASMGQLLNPAYIFLNVFGLTLVAKLQAENYIRKSGINYTIIRPGGLRNDPPTGNVVMEPEDTLYEGSISRDQVAEVAVEALAYPEASYKVVEIVSRPDAPKRSYHDLFGSISHR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00214 289 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 55 270 IPR036291 -
Spst3g00214 289 Gene3D - 44 277 - -
Spst3g00214 289 PANTHER FLAVIN REDUCTASE-RELATED 49 287 - -
Spst3g00214 289 Pfam NAD(P)H-binding 61 258 IPR016040 -
Spst3g00214 289 CDD SDR_a5 56 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00214 Spst-Chr3 3905000 3907274 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00214 54 186 Monolignol Biosynthesis Gene Families AT2G33590 33.099 8.21e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00214 - - gmx:100812074 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00214 3 3905000 3907274 Spst3g00214 3 3905000 3907274 ECH