Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00186 ATGCAAGAAGAAAGGCAAAGGCTGGTGGCGGTGCCACGTGGCATGGTTAGAGTGGAAGAGTGGTTTGGGGGTTTCAACAAAGAGGAAGAGAGAGCACAACAACTCTCTCTCTCCTGCCATATGTTGGCTGTAGATTGGTGGCTTTGGTTGTATTTATTGTTTGTGGGTGCTGTGACATACTCTGACTTGCTGTTGATTGTGTATGCTGCTGCTTTCTTACCTTTGATGGAGATTGTGTATGATTCTTCAGATTCAGTCAGGATTGCAAGTGGCAGTTTGGTTTTCAAAGAGGAGGCGAACTTTGTCCATCCTGCTGATGGATACTTAAATAAGAGGCAGTTTATGGTGATCAGGAATAATGTCGATGCAGTGCCTAAAATGCTTAACAGGAACTGGGTTTTAAAGCGTAAGCGAAGAAAGCTTCCTTTTGGGCCCGATCAGTCCTCTGCTAAAGAGCAATCCAACAGTAAAGAAGAAAATTCACTAACATCTGAATCTTCTAGAAATGCTTCAGCTAAACGTGCGCTAAAGACTGAAGTAGCTACAGATCAAATTTCATCTAAGAAGAAAGGAAATGATGGGGATAAAACTGGTGACTTGGCCTTGTCTCGTTCAGTTGGAAACAATATTTTTGTCGCTCTGCACTTCTGCCCATTACCCTATGTGTTCTGGCACTTTAACTGCAAGCTGGGCATCCTGGCCTATGTCTGTCTCAGACTGCTTGAGTTGAGAAGTCACACACTGCCGATGTCTGGTGGCTTGGCAGATTTAGTTAAGATGTATGTGTTAAATTATTACTATGAATGTGTGATCTGCGATGTTGGTGGCAACTTACTGTGCTGTGATAGCTGTCCTCGCACTTATCATTTACAATGTCTTGATCCACCTCTTAAGCGCATCCCTAATGGGAAGTGGCAATGTCCAAGTTGCTTTGAAGGGAATGATCAACTAAAGCCCATAAACCAGTTGGATTCAATTTCAAAACGAGCAAGGACAAAGATTGTCCCTGCAAAATCAAAAGGTCAAGTTAACTCACTTAACCTTGAAAAAGTTTCTGGACTTTTTGGAAGTAAACTTATTTCAAAGAAAAGGTCCTCAAGTAAAGGGAAATCTATTTCAACTATGGGAGTCAAATTCTTTGGAAAGAAATTGTTGTCTTCCTCAGTTGATGAAACTTGTGGTGACAAACCTATTGACCCATCTCTTGGGAGTCCTATGGAAGGAACTTCGTCATGTGTGGATGCTGATGAAAAGAAATCAAGCTTGTCCCCAACAGACTCCCCTGTAGACAGGAAATCAACTTCACCAGGCAAGGAAGTTTTATTTCTCTCTAAAGTTACTGAGTTAGAAGCAAATGATGAACATCTGGAGGGGAAGACTGATTCATCTTACAATAAGACTCCTTTAAGAAAAACACTTGTTCTTGCTATTGCTGCTAATGGTGAAGAAGTGAGGAAAAGGAAGAATAAAGTTGTTACTGACAGTGCTAGTCAGAAAAAGCAAAAAACTGAAAAGGGCAAAAAAATTGCTAATCCTTCTCCTATAAAGTCCAAGTCTGGGAATAATAAAGCACACAAGAAGCAGAAGTCTATAACCCATAACATTTCTGCATCTTTACCAAAAGATGATGTTGGAAACAAGAATTCTCAAGCCCAACAGAAAGATGAGAAGTTCTCTCGTGTAATGAAGGACACATCAAATGAACTGGATAAAGCAGGAAATCCTGTAGACGAAACTTTGATGCACGAAGATAGTGCTGTTGTTGAGTCTCTGCAGGTTGATCGGGTTCTAGGGTGTCGAATTCATAGTGAGAATACAAATTCATTTCATAACTTGTCCTTGAATGTTGAGGGTGGCTCACCTTCCGGTGCTCTGGTAGTATCAGAAAATCAGACCAGGCTACTAGAGGACAATTCTGCTTGTCCTAATGATTTGGATGATGAATCAACTGAAAATCATATTGATGATCAAAATGTCGTCAAGGGTTCTGATGAAGAAGGAAATTTGACAAACACTAATAGAGTGGAAAAAATTCATGTATACAGAAGATCAATAATGAAAGAAAGTAAGAAAGGAAATCCTGTAGATTCATTGAGTAAATCCACTGATGATTTAGGTTCCTGTGCCAGGGATGGTAAAGGTCAGGATGATTCTGCTGACCAGTTGAACAAACCAAATGACAAGCTGGAGACAGAGGAGAGCATTGATGTTGCTTTACGAAGTGAGGATAATAGTGAGCTTCCAAAAAATTGTGAAAGACATCTCACTCTTGAAGCAAAACAAAAGGAAATGAACGCAGAGAAGGGGATGGGTGGCAGTATTGATGATAAGGCTCAGAATGCTAATGTAGTTGAATGTGCTGGTCCAAATGGAGAGGATGTTCTCTATGAATTTCTAGTTAAATGGGTAGGAAAGTCTCATATTCATGATAGTTGGATTTCTGAATCCCAGTTAAAAGTTCTTGCAAAGAGAAAACTAGAAAATTACAAGGCAAAGTATGGGATGACGATTATTAATATTTCCGAGGAGCGTTGGAAGCAGCCTCAGCGGGTGCTTGCCCTTCAAACTTCAAAACATGGAACATCTGAAGCATTTGTAAAATGGAGCGGACTGCCTTATGATGAATGCACTTGGGAAAGTTTAGATGAACCAGTGCTTCAAAATAATTCTCATCTGATTACACTTTTTAATAAGCTTGAAACTCTCACGTTGGAAAGGGATTCATCAAAGGAAAATTCAACTAGGAGAAACAATGATCATCAAAATGATATTTTCAATCTTATAGAGCAACCTAAGGATTTGAAAGGTGGTTCTTTGTTTCCTCATCAGCTTGAGGCTCTGAACTGGTTGCGTAAGTGCTGGTATAAATCCAAGAATGTGATACTTGCTGATGAGATGGGACTTGGGAAAACAGTATCTGCTTGTGCTTTTATTTCATCATTGTATTTTGAATTCAAAGTCTCACTTCCTTGCCTGGTCTTGGTACCGCTTTCTACAATGCCTAATTGGCTTGCTGAATTTGCACTATGGGCTCCAGATGTGAATGTTGTTGAATATCATGGCTGTGCTAAAGCAAGAGCCATAATTCGCCAGTATGAATGGCATGCAAATGATCCAAGTGGATTGAATAAGAAAACAGAATCCTATAAATTTAATGTGCTTTTAACTACATATGAAATGGTTCTTGCTGATTATTCCCATTTGCGTGGAGTTCCTTGGGAAGTTCTTGTTGTCGATGAAGGCCATCGACTTAAGAATTCTGGAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCCTTTCAACATCGGGTACTGTTGACAGGTACCCCTCTCCAGAACAACCTTGGTGAGATGTACAACTTACTTAACTTCTTGCAGCCAGCTTCATTTCCTTCTCTATCTTCATTTGAGGAGAAATTTAATGATCTTACGACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCACATGCTTCGTAGACTTAAAAAGGATGCCATGCAAAATATTCCTCCCAAGACAGAAAGAATGGTTCCTGTTGAGTTGTCATCCATTCAAGCTGAATATTATCGTGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATTGGGAAAGGGGTTGCCCAACAGTCTATGCTGAACATTGTAATGCAATTGAGGAAGGTCTGTAATCATCCATACCTCATACCAGGAACTGAGCCTGAATCTGGTTCTGTCGAATTTCTTCATGAAATGAGAATAAAGGCTTCAGCTAAGTTAACCCTTCTGCATTCTATGCTAAAGATTTTACATAGGGAAGGTCACAGAGTTCTTATTTTCTCACAAATGACCAAGCTTCTTGACATTCTGGAGGACTATTTGACTATAGAATTTGGGCCTAAAACATATGAGAGAGTAGATGGATCTGTTTCTGTAGCTGATCGCCAGACAGCAATTGCACGCTTTAACCAAGACAAAAGTCGATTTGTTTTCTTGTTATCAACTCGCTCTTGTGGACTTGGAATAAATTTGGCAACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCCCATGCAGATATCCAAGCAATGAATCGAGCGCACAGAATTGGACAATCAAATAGACTTTTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGCATCTTGCAGCTTGCTAAAAAGAAATTGATGCTTGATCAGCTATTTGTAAATAAGTCTGGATCTCAAAAAGAAGTAGAAGACATTTTAAAGTGGGGAACTGAGGAACTCTTCAATGATTCTCCTGGATTGAATGGGAAAGACATGAGTGAAAATAACAATAATAGTAAAGATGAGGCAGTAGCCGATGTAGAACATAAGCATAGGAAGAGGACTGGTGGTCTGGGAGATGTATACAAGGATAAGTGTACTGATAGCAGCAGCAAAATTCTGTGGGATGAAAATGCTATTTTAAAATTGCTTGATCGTTCAATCCTTCAAGATGGTTCAACTGATAATGCTGAAGGGGATTCTGAGAATGATATGCTGGGCTCAGTGAAGGTTAGGTACCTTTGCTTTGTAAAGGCCCTTGAGTGGAATGATGAACCAACTGAAGAGCATGTAGTGGGTGAATCTCCTCCTCCTGGGACTGATGATATGTGTCCACAAAATTCTGATAAGAAAGAGGATAACCCAGTGAATGTACATGAAGAAAATGAATGGGACAAACTACTGCGTGTGAGTGTCACCAGACCACTGATTTACACTACTCTGACAAACAGATGGGAGAAATATCAAAATGAAGAGGAAGCAGCTCTTGGTCGAGGGAAGAGGCAGAGGAAAGCTGTTTCTTATAGGGAAGTATATGCTCCACATCCAAGTGAAGCAATGAGTGAGAGTGGTGGTGAAGAAGAAAAAGAGCCAGAACCAGAGCCTGAGCGTGAATATACACCAGCAGGACGGGCCCATAAGACAAAATATGTCAAACTCCGAGCACGGCAAAAGGAGCTACTTGCCCTACGGAAGATGATGAAAGAAGCAAATCCTGCTGAGGGACTTCCAAATAATGAACTCACGCATTCGCCAGCTATTGCCAAGGGTGGAGATCTAGGGGCTGGACCGATGCACTCAGTTCAAGAGGTGCCTTCTATAAACTTAGAGGACAGCAAGTACACACAACTTTCAGAAGCTCAGAATAGCAACACTGACTCCTTATCAAGGATTGACAAACTTTCCAAACATAAAATGAGCAGTCATTTTGATGCTTCTGTCAGTAATCTAGGCCGTTCTCTCCCTGATATTTTTCTTCCAAGTCACCCTAAGGGGGGGCTGAGCATGACAAATAATATGTCCACCAACAATTTGTTGCCCGTACTAGGGCTTTGTGCTCCCAATACAAAACATATAGAGTCATTGGAAAGTAATACTTCAAAGTTAAATTGGAGGCAACATAGACATGGATCCAGACAAGAGTTTCCTTTCAGTCTTGCCCCTTGCTCTGGGACATCCATGGATGCTGAGGTCAGAAATAAGGAAGTGGTAACAAATACCAAGCTAGCAGATGCATCAACAGAAAATTTACAACCAAGTTTCAAAAATAGTATCCCTGATAACAGTCTTCCATTTGTTCCATTTCCACCCTCTGTGCAAGGAAAGGAATCCGATGCATTTGAAAATTCTGGTGCTAGATTCTCTCATTTTCAGGAGAAGATGGCCTTGTCCAACCTGCCATTCGACGAAAGGTTGCTGGCCAGGTTTCCACTCACAACCAAGAGCATACCAAATTCACATTTGGACCTTTTGCCTAATTTGTCCATAGGAGGAAGACTTGAATCTTTGAATGGAGATCTTCCAACAATGCCAGCATTGCCTAATTTCAAAATACCCCCTGAAGATTTATTCAGATATAATCAGCAAGACAGGGATGTACCCCCTATTTTGGGTTTGGGACAAAGGTCAACCCCATTCTCATCTTTCCCAGAAAACCATAGGAAGGTGCTTGAAAACATAATGATGAGAGCAGGATCTGGATCAAGTAACTTATTGAAAAAGAAGTCAAAATCAGATGGGTGGTCTGAAGATGAACTTGACTCCCTCTGGATTGGTGTTCGTAGGCACGGAAGGGGTAATTGGGATGTTATGCTTAGAGATCCCAAGTTAAAGTTTTCAAAGTATAAAACATCTGAAGATTTATCAGTGAGGTGGGAAGAGGAACAGGTAAAGGTCTTTCAGGGGCCAGCTTTTCCCTCACAAAGATCCTCCAAGACAACAAAGTCTGCCAAATCAGCACATTTTCCAATCTCTGATGGTATGATGGAAAGGGCCTTGCATGGGAGCAAATTTCTTTTGCCACCAAAATTTCATAACCATCTGACTGACATGAAATTAGGGATAGGTGATTCTGCATCTGGTCTGTCACATTTTAGTGCATTGGACCGACCAAGTTTGCAAAATGATCATTTTGTACCTCTTCCATCTTGGAGTTATGATAAAAATAGATCTAAATTTCCTGAAGGTGCTTCTGCTGAAACATCTGATAGACCAGGTACTTCTTCCAGTGTACTGACTGAACGACCATTTCTGCTCAATTCTTTTGGAACCAGTACCTTGGGCTCTTTAGGTTTGAATTGCTCAGGCAACATTGATGCACAGCAGAAGGAGGATGACCAAGGAAACACCAAGCGTGGAAAGTTACCCATACTTCTAGACGAACCACCTATTGATATGCGTGATAATCAAGTTAATGTAGGAAATGGTGAGTCTACTAGCTCTGGATTGTTATCTAACCCCATAAGATCTGATCTTTTACACTCAAAAGGAGAGGAAGTGGGTGGTAGCAGTACTTCAAAAGACAAGCTTCCCCACTGGTTACGAGAAGCTGTGAGCTCCCCAGCCAGACTTCCCGGGCCTGAACTGCCACCCACAGTATCAGCCATTGCTCAATCAGTTCGCCTGTTATATGGGGAAGATAAGCCTACAATTCCTCCATTTGTGATTCCTGGACCACCTCCTTCCCTACCAAAGGACCCCAGGTGTAGTGTCAAGAAGAAAAAGAAGAGAAGATCACATAAGTTCAATCGAGGTCTTCCAGATTTTGCTGGCAACATCAGGGACTTGCACAGAAGCCACCATGTTGATAATGGTGCCTCAAGCTCAATGGGCCCACCATTGCCTCTACTTTCTCAGACAGGACCTCTTGGATCTCAGCAGATTGAGTCTGACCTTAACTTGCCTCTAAATTTGAAAGGGGCAAACTCGTCACACTCTTCCAAAAAAGCAATTTCAGGGATGTCTCCATCTCCCGAAGTGCTCCAGTTGGTTGCATCCTGTTCTGGCTCCCATCTTCCATCGATCACCACCGGTGCTTCAAACATTCTTGACAACAAGCTTCCAATGCCAAGGCCTGTTGGCAGAGCCAAATTTAAAGACTCAGAAGGTGCCTTCAAAAATAAGAATACTAGGCAGGTTTCACCAAAAATTTGGTGTCCACCTCTAGAGCAAGAAGTACATCATCTTGATAGTGGAGATTCCAGCAAGACTCAGTCGGATCCCTCTCGGGTTGAACGGCCCGATGAAGTGGAGGTGTCATCTGAGGGAACTGTCTCAGACCATGCTGATAAACCTATGGACAATCTCAAGATGGAGGTGATGAGTGAGTTCAGTGTTCTCTTTAGCCTTTGTAGCTACAACATTGGTGTGATCAAATAA 7689 0.4144 MQEERQRLVAVPRGMVRVEEWFGGFNKEEERAQQLSLSCHMLAVDWWLWLYLLFVGAVTYSDLLLIVYAAAFLPLMEIVYDSSDSVRIASGSLVFKEEANFVHPADGYLNKRQFMVIRNNVDAVPKMLNRNWVLKRKRRKLPFGPDQSSAKEQSNSKEENSLTSESSRNASAKRALKTEVATDQISSKKKGNDGDKTGDLALSRSVGNNIFVALHFCPLPYVFWHFNCKLGILAYVCLRLLELRSHTLPMSGGLADLVKMYVLNYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGNDQLKPINQLDSISKRARTKIVPAKSKGQVNSLNLEKVSGLFGSKLISKKRSSSKGKSISTMGVKFFGKKLLSSSVDETCGDKPIDPSLGSPMEGTSSCVDADEKKSSLSPTDSPVDRKSTSPGKEVLFLSKVTELEANDEHLEGKTDSSYNKTPLRKTLVLAIAANGEEVRKRKNKVVTDSASQKKQKTEKGKKIANPSPIKSKSGNNKAHKKQKSITHNISASLPKDDVGNKNSQAQQKDEKFSRVMKDTSNELDKAGNPVDETLMHEDSAVVESLQVDRVLGCRIHSENTNSFHNLSLNVEGGSPSGALVVSENQTRLLEDNSACPNDLDDESTENHIDDQNVVKGSDEEGNLTNTNRVEKIHVYRRSIMKESKKGNPVDSLSKSTDDLGSCARDGKGQDDSADQLNKPNDKLETEESIDVALRSEDNSELPKNCERHLTLEAKQKEMNAEKGMGGSIDDKAQNANVVECAGPNGEDVLYEFLVKWVGKSHIHDSWISESQLKVLAKRKLENYKAKYGMTIINISEERWKQPQRVLALQTSKHGTSEAFVKWSGLPYDECTWESLDEPVLQNNSHLITLFNKLETLTLERDSSKENSTRRNNDHQNDIFNLIEQPKDLKGGSLFPHQLEALNWLRKCWYKSKNVILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFALWAPDVNVVEYHGCAKARAIIRQYEWHANDPSGLNKKTESYKFNVLLTTYEMVLADYSHLRGVPWEVLVVDEGHRLKNSGSKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVADRQTAIARFNQDKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDMSENNNNSKDEAVADVEHKHRKRTGGLGDVYKDKCTDSSSKILWDENAILKLLDRSILQDGSTDNAEGDSENDMLGSVKVRYLCFVKALEWNDEPTEEHVVGESPPPGTDDMCPQNSDKKEDNPVNVHEENEWDKLLRVSVTRPLIYTTLTNRWEKYQNEEEAALGRGKRQRKAVSYREVYAPHPSEAMSESGGEEEKEPEPEPEREYTPAGRAHKTKYVKLRARQKELLALRKMMKEANPAEGLPNNELTHSPAIAKGGDLGAGPMHSVQEVPSINLEDSKYTQLSEAQNSNTDSLSRIDKLSKHKMSSHFDASVSNLGRSLPDIFLPSHPKGGLSMTNNMSTNNLLPVLGLCAPNTKHIESLESNTSKLNWRQHRHGSRQEFPFSLAPCSGTSMDAEVRNKEVVTNTKLADASTENLQPSFKNSIPDNSLPFVPFPPSVQGKESDAFENSGARFSHFQEKMALSNLPFDERLLARFPLTTKSIPNSHLDLLPNLSIGGRLESLNGDLPTMPALPNFKIPPEDLFRYNQQDRDVPPILGLGQRSTPFSSFPENHRKVLENIMMRAGSGSSNLLKKKSKSDGWSEDELDSLWIGVRRHGRGNWDVMLRDPKLKFSKYKTSEDLSVRWEEEQVKVFQGPAFPSQRSSKTTKSAKSAHFPISDGMMERALHGSKFLLPPKFHNHLTDMKLGIGDSASGLSHFSALDRPSLQNDHFVPLPSWSYDKNRSKFPEGASAETSDRPGTSSSVLTERPFLLNSFGTSTLGSLGLNCSGNIDAQQKEDDQGNTKRGKLPILLDEPPIDMRDNQVNVGNGESTSSGLLSNPIRSDLLHSKGEEVGGSSTSKDKLPHWLREAVSSPARLPGPELPPTVSAIAQSVRLLYGEDKPTIPPFVIPGPPPSLPKDPRCSVKKKKKRRSHKFNRGLPDFAGNIRDLHRSHHVDNGASSSMGPPLPLLSQTGPLGSQQIESDLNLPLNLKGANSSHSSKKAISGMSPSPEVLQLVASCSGSHLPSITTGASNILDNKLPMPRPVGRAKFKDSEGAFKNKNTRQVSPKIWCPPLEQEVHHLDSGDSSKTQSDPSRVERPDEVEVSSEGTVSDHADKPMDNLKMEVMSEFSVLFSLCSYNIGVIK 2562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00186 2562 ProSiteProfiles Zinc finger PHD-type profile. 266 313 IPR019787 -
Spst3g00186 2562 CDD CD2_tandem 845 898 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 142 196 - -
Spst3g00186 2562 SUPERFAMILY Homeodomain-like 2017 2063 IPR009057 -
Spst3g00186 2562 Pfam PHD-finger 269 310 IPR019787 -
Spst3g00186 2562 Pfam Helicase conserved C-terminal domain 1258 1369 IPR001650 -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 485 559 - -
Spst3g00186 2562 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1258 1417 IPR001650 -
Spst3g00186 2562 CDD SF2_C_SNF 1253 1380 - -
Spst3g00186 2562 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 1173 1400 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 2208 2235 - -
Spst3g00186 2562 SMART helicmild6 1284 1369 IPR001650 -
Spst3g00186 2562 Gene3D - 756 834 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 1675 1703 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 485 511 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 670 694 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 706 732 - -
Spst3g00186 2562 SMART DUF1087_2 1546 1620 IPR009463 -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 531 547 - -
Spst3g00186 2562 SMART ultradead3 935 1139 IPR014001 -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 646 662 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 1531 1562 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 2322 2397 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 147 173 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 1616 1651 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 2322 2336 - -
Spst3g00186 2562 CDD CD1_tandem 796 830 - -
Spst3g00186 2562 Pfam SNF2-related domain 957 1232 IPR000330 GO:0005524|GO:0140658
Spst3g00186 2562 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 951 1128 IPR014001 -
Spst3g00186 2562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1165 1423 IPR027417 -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 2162 2181 - -
Spst3g00186 2562 ProSiteProfiles Chromo and chromo shadow domain profile. 764 832 IPR000953 -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 395 438 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 2496 2534 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 1428 1455 - -
Spst3g00186 2562 CDD PHD2_CHD_II 269 310 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 642 732 - -
Spst3g00186 2562 ProSiteProfiles Chromo and chromo shadow domain profile. 846 908 IPR000953 -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 1439 1455 - -
Spst3g00186 2562 CDD SANT_TRF 2018 2062 - -
Spst3g00186 2562 Gene3D - 930 1172 IPR038718 -
Spst3g00186 2562 SUPERFAMILY FYVE/PHD zinc finger 264 313 IPR011011 -
Spst3g00186 2562 SUPERFAMILY Chromo domain-like 792 835 IPR016197 -
Spst3g00186 2562 Pfam Chromo (CHRromatin Organisation MOdifier) domain 847 898 IPR023780 -
Spst3g00186 2562 Gene3D - 1173 1400 IPR027417 -
Spst3g00186 2562 ProSitePatterns Zinc finger PHD-type signature. 269 310 IPR019786 -
Spst3g00186 2562 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 164 2463 - -
Spst3g00186 2562 Gene3D - 1990 2090 - -
Spst3g00186 2562 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 911 1163 IPR027417 -
Spst3g00186 2562 Gene3D - 848 898 - -
Spst3g00186 2562 MobiDBLite consensus disorder prediction 2373 2397 - -
Spst3g00186 2562 SUPERFAMILY Chromo domain-like 838 885 IPR016197 -
Spst3g00186 2562 SMART PHD_3 268 311 IPR001965 -
Spst3g00186 2562 SMART chromo_7 590 834 IPR000953 -
Spst3g00186 2562 SMART chromo_7 844 901 IPR000953 -
Spst3g00186 2562 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 332 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00186 Spst-Chr3 3341830 3367679 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00186 919 1412 RAD5 or RAD16-like Gene Family AT1G02670 26.541 1.59e-36 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Spst3g00186 SNF2_N 2e-57 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00186 - - gmx:100793933 3869.32