Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00184 ATGAGTCTCCGGAGATGGGTACCAACTTTAAAAGAGAAGCTTGGAGCAGACAAGTTAGAAACGAAAAACACTAAGCGAGAAGTTTTGACCAATAAACATGGAACTTCGCTGTTTCTGTCGTGTTGTCGCGCGTGTCAGCTGCAGCTAGCAAGGAAGATGGTGAAGGGACGCCAAGGAGAGCGCATCAGACTCTATGTTAGGGGTACGATCCTTGGATACAAAAGGTCCAAGTCAAACCAATATCCCAATACATCCCTGATCCAAATTGAGGGAGTGAACACCAAAGAAGAAGTAGGATGGTATGCTGGCAAGCGAATGGCCTATATTTACAAGGCTAAGGTGAAGAAGAATGGAAGCCATTACCGCTGCATATGGGGCAAGGTTACAAGGCCTCATGGCAACAGTGGTGTTGTTCGTGCAAAGTTCAAGTCAAACCTTCCTCCCAGATCAATGGGAGCACGTATACAGGTGAGAAGTCGCTCAGTAGAATTCACAACTTCTTTGTAG 507 0.4615 MSLRRWVPTLKEKLGADKLETKNTKREVLTNKHGTSLFLSCCRACQLQLARKMVKGRQGERIRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGVVRAKFKSNLPPRSMGARIQVRSRSVEFTTSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00184 168 ProSitePatterns Ribosomal protein L35Ae signature. 126 147 IPR018266 GO:0003735|GO:0005840|GO:0006412
Spst3g00184 168 Gene3D translation elongation factor selb, chain A, domain 4 59 162 IPR038661 -
Spst3g00184 168 FunFam 60S ribosomal protein L35a 59 162 - -
Spst3g00184 168 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 66 158 IPR001780 GO:0003735|GO:0005840|GO:0006412
Spst3g00184 168 Pfam Ribosomal protein L35Ae 64 157 IPR001780 GO:0003735|GO:0005840|GO:0006412
Spst3g00184 168 SUPERFAMILY Translation proteins 64 157 IPR009000 -
Spst3g00184 168 PANTHER 60S RIBOSOMAL PROTEIN L35A 54 158 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00184 Spst-Chr3 3322034 3326482 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00184 53 157 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 89.524 1.41e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00184 K02917 - gmx:100305958 213.386