Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00162 ATGGCGAATGAAGCAAGTAGCAGTAGCACTAACCCGAACAGAACGCTCTGTACGGAAAGATATGAACTTGGTCGGGTCTTGGGTAAAGGAAACTCCTCCGTCGTGAAGCTTGCACGTAACACTACCACCGGAGATTTTGTGGCCATCAAAATTTTCAACAAAGAACAGCTTCTCGAAGGCAAGAAAGAAGCTCACAGGAGAATAATAAAAAATGCTATTAAACAAGAAATATCAATACTGGGAATGGTTAAACACCCAAATGTGGTGCGTGTGATTGAGGTGATGGCTACCAAGAAAAAGATATATATTGTAATGGAACATGTTGATGGGGAACTGTTTGATAAAATTAATAAGACGAGTCTCTGTGGAATGAAAGAACGCGAAGCAAACAAATATTTCCACCAGCTTATATGTGCTTTGGATTACTGTCACAGCAAAGGTGTTACCCATGGCGACATAAAGGAAAGTGAACCGGAGAATGTGTTGGTGGGTGATGATGGAGTGATTAAATTATCAGATTTTGGATTGAGTGCTCTCCCCAAACAAGCTGATGTGAATGGGTTTCTTTACTGTACATATGGTACGCCAAAATATACCGCTCCAGAGGCAACAAAATTTTACGGCTATGAGGGTCGAAAGGCTGATATTTGGGCATGCGGTGTCACTCTTTTCTTTATGGTTGCTGGTTATTTGCCCTTCACCGATGCTGACGAGAATTTAAAGAGACTGGTTCGGAAAATGCTTGATCCCAATCCTCATACACGGATCACAATTGATCAGATGTATCAGGATGAATGGTTCATGAAGTTTTATCAACCACTAAGATTTCCACTGGAAAGTGTTGGTTTTGATTATGATTCACTAGTTCTTCCAGCCAAGGAGGGAGAAACAGGGTCTTCATCACAACCACCGGCCACGAATGCGCTTGCGATGTGTTCTACCTATCTCGGCTTCAACCTTGTAAGAAATCTTTTGAACAAGGTACACGTTAAATGCGAAACTATATTCATATCCCAACATCCCATTGATGATATAATAGAGCAAATTGAGGTTACAGCAAAGAGTTTAGGATTTAAAGTTCGGAAGAGAAGCTTTCAGATGAATATCACTCTGAGAGAGGAACTAGCTAGACGCCATGGTCACCAATCTATAGTCACTAAGATCTATGAGATGGTCCCTCATTCTTACATGGTTGAGGTTCGTAAGGTTTCAGGAGATAATCTAAAATTCCATGAGTTCTACAAGAAAGTGAGTGAAGGGCATATCATTTTGAAAGCAGAACCTATAGAGACATAA 1296 0.4074 MANEASSSSTNPNRTLCTERYELGRVLGKGNSSVVKLARNTTTGDFVAIKIFNKEQLLEGKKEAHRRIIKNAIKQEISILGMVKHPNVVRVIEVMATKKKIYIVMEHVDGELFDKINKTSLCGMKEREANKYFHQLICALDYCHSKGVTHGDIKESEPENVLVGDDGVIKLSDFGLSALPKQADVNGFLYCTYGTPKYTAPEATKFYGYEGRKADIWACGVTLFFMVAGYLPFTDADENLKRLVRKMLDPNPHTRITIDQMYQDEWFMKFYQPLRFPLESVGFDYDSLVLPAKEGETGSSSQPPATNALAMCSTYLGFNLVRNLLNKVHVKCETIFISQHPIDDIIEQIEVTAKSLGFKVRKRSFQMNITLREELARRHGHQSIVTKIYEMVPHSYMVEVRKVSGDNLKFHEFYKKVSEGHIILKAEPIET 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00162 431 FunFam Maternal embryonic leucine zipper kinase 15 281 - -
Spst3g00162 431 CDD CIPK_C 307 419 - -
Spst3g00162 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 406 - -
Spst3g00162 431 FunFam Aurora kinase A 13 111 - -
Spst3g00162 431 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Spst3g00162 431 Gene3D Kinase associated domain 1, KA1 300 425 - -
Spst3g00162 431 Gene3D Transferase(Phosphotransferase) domain 1 13 284 - -
Spst3g00162 431 ProSiteProfiles Protein kinase domain profile. 21 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00162 431 Pfam NAF domain 307 362 IPR004041 GO:0007165
Spst3g00162 431 Pfam Protein kinase domain 21 238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00162 431 SUPERFAMILY Protein kinase-like (PK-like) 15 279 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00162 Spst-Chr3 3041124 3044308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00162 21 420 CBL-interacting serine-threonine protein kinases AT1G01140 42.227 4.68e-107 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst3g00162 Pkinase 4.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00162 - - pvu:PHAVU_002G178400g 476.092