Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00157 ATGTCCAAGTCACCTTCGGAGTGTGATGCTGACATTGACTGTGTGGGAAATTATGAACTGGGTAAGACCCTGGGCGAGGGAAACTTCTGCACCGTGAAGGAAGCACTTCACGTTGCCAGCGGAAACAAAGTGGCCATCAAAATTATCGACAAAGAAAAAGTTGTCAATAATAAGGATGTGGTAGCCATGGACACGTGGTATAAGCATGAATACCATGCAGTCTTACCAGATATATTATATGATGTTCACCGTTTTGCAGATAGAACGAAACCTATCAAAAATGGAAATGATTAG 294 0.4218 MSKSPSECDADIDCVGNYELGKTLGEGNFCTVKEALHVASGNKVAIKIIDKEKVVNNKDVVAMDTWYKHEYHAVLPDILYDVHRFADRTKPIKNGND 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00157 97 SUPERFAMILY Protein kinase-like (PK-like) 13 68 IPR011009 -
Spst3g00157 97 Gene3D Phosphorylase Kinase; domain 1 8 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00157 Spst-Chr3 2933592 2934086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00157 15 60 CBL-interacting serine-threonine protein kinases AT1G01140 56.522 2.42e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst3g00157 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00157 - K08797 pvu:PHAVU_002G179600g 66.2402