Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00156 ATGGTGCATCTGTACGAGGTGATCTCTACTGAACAACACTTGTTTATTGTACTGGAACTTGTAGATGGTGGGAAACTGTTTGACAAAATTGAGACAAGCACGACCCGGAGACTGACAGCGGCCGAAGCAAGAGAATATTTTCAGCAGCTTACATATGCTCTGGCTTTCTGTCACAATACCGGTATTTCCCATAAAAACTTAAAGCCAGAGAATTTGTTGCTGCGTGCTGATGGAAGGCTTAAAATATCATATTTTGGACTGAGTGCACTGTCCCAAGAAGTTGGAAGAGATGGGATGGTTTGTTCTAGTATACCATGCGGTGCGCCACAGTATAGGGCTCCAGAGATGGAAGCCCTCACGGGCTATGAGGGTGCACGGGCTGACATCTGGTCATCTGGTGTTATTCTTTATTACATGTTGGCTGGTTATCTACCCTTCAACAGTGACAACATTAGGATCACATATCTAAAGACTTGTGTGGCTGATTTCACCTGTCCTTCATTTTTCTCTCCAAGTTTAAAGAGACTAATTAAGAGAATCCTTGATCCCAATCCTGCTACTCGGATTACAGTTGATGCGATCTTTAGGGATGAATGGTTCAATGGTGATACTGTGGATCATCCTCCTCCTCTATTAGATCCTGTCGCTGCGGAGGGGCAAGATGCAGGGTCTACAATACATGAAATCAAGAATTCATATGATAATACACGTATCCCTTCCATCTTCAGATGTGAACCATTACTGCGATTAATAAATGTACTTGCTTTAAGGGAAAGACGTTTCGTGGCCAAATTTTGTAAGAGTGAGATAATTTCAGCATTGGAAAAATCTTTAAGAAGTATGGGTCTTCGTGTGAAGAACGTAAAGTTGGAGATTCAAGGGAGGGTTGGACCCGAACAAAAAACTCTATCTATATATACAAAGATTTATAGGGTGTCCTCGCCTCCCTTTCACCTGGTTGAGATTTGGAAGACTGGAGGAGATGCTCGGGATTTTGACAAGTTCTACGCGGAACTATGTGATGGGATGAAGGAGATCATTTGGGATGAAGGAAGTGATGGCTAA 1065 0.4272 MVHLYEVISTEQHLFIVLELVDGGKLFDKIETSTTRRLTAAEAREYFQQLTYALAFCHNTGISHKNLKPENLLLRADGRLKISYFGLSALSQEVGRDGMVCSSIPCGAPQYRAPEMEALTGYEGARADIWSSGVILYYMLAGYLPFNSDNIRITYLKTCVADFTCPSFFSPSLKRLIKRILDPNPATRITVDAIFRDEWFNGDTVDHPPPLLDPVAAEGQDAGSTIHEIKNSYDNTRIPSIFRCEPLLRLINVLALRERRFVAKFCKSEIISALEKSLRSMGLRVKNVKLEIQGRVGPEQKTLSIYTKIYRVSSPPFHLVEIWKTGGDARDFDKFYAELCDGMKEIIWDEGSDG 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00156 354 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 2 325 - -
Spst3g00156 354 FunFam Maternal embryonic leucine zipper kinase 1 209 - -
Spst3g00156 354 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00156 354 Gene3D Transferase(Phosphotransferase) domain 1 1 245 - -
Spst3g00156 354 SMART serkin_6 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00156 354 Gene3D Kinase associated domain 1, KA1 246 349 - -
Spst3g00156 354 SUPERFAMILY Protein kinase-like (PK-like) 2 216 IPR011009 -
Spst3g00156 354 Pfam Protein kinase domain 2 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00156 Spst-Chr3 2930959 2933581 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00156 1 349 CBL-interacting serine-threonine protein kinases AT1G01140 39.362 4.84e-92 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst3g00156 Pkinase 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00156 - - gmx:100820011 321.242