Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00111 ATGGGTTTACCTTCTCTCTTTCTTGCTTTAATTCCTCTGTTGACATCATTTGCTGTTTGCCAACTTGAAGAGTTTGTGAGCATTGATTGTGGGGGGTCAAGTAATTACACCGATAACAGCACGGGGTTGGCATGGATCTCAGACTCTGGGATCATGCAACATGGCATTTCTGTGGAAGTGGAAAGTCCAAAGGGAAATATGGTGCAGTACCAAAAGAGGAGAGACTTTCCCACAGACAGCAAGAAGTACTGTTACACACTAAGCACAGAGGAGAGAAGGAGATATTTGGTGAGAGCAACGTTTCAGTATGGAAGCTTGGAGAGCGGAGACACATACCCTCAGTTTCAGCTCTACTTGGATGCAACCAAATGGGCTACTGTATCAATATATGATGCCTCAAGAATATATGTTAAGGAAATGATAATCAGGGCACCCTCAAATTCTATTGATGTCTGCGTGTGCTGTGCTACCACTGGTTCTCCTTTCATTTCCACCCTTGAGTTGCGACCATTGAATCTTTCAATGTATGCCACGGATTTTGAAGACAATTTCTTCTTAGAAGTTGCTGCGAGAATAAATTTTGGTGCTCCGACTGAGGATGCTGTCAGGTACCCTGATGACCCATATGATAGAATTTGGGATTCTGATCTCATCAGAAGGCAAAACTATCTTGTTGGGGTAGCCCCAGGCACGGAAAGAATTGGCACTACAAAGAACATATATGTAGAGACAAGAGAATATCCACCTGTCAAAGTAATGCAAACTGCAGTTGTTGGCAGAAAAGGAGTACTCAGCTACAGATTGAACCTGGAAGACTTCCCTGCCAATGCTCGAGCATATGCATATTTTGCAGAGATTGAAGATTTGGATAAGAATGAGAGTCGAAAATTCAAATTAAAGCAACCTTATATAGCTGACTATAGCAATGCAGTGGTTAACATTGCTGAGAATGCCAATGGGAGCTACACTTTATATGAACCAAGTTACATGAATGTTACTCTAGAATTTGTTTTATCATTCTCGTTTGTTATTACCCCGGGTTCTACTCGAGGGCCTCTTCTAAATGCATTGGAAATAAGCAAATATGTAGAGATTGCTTCAAAGACAGACAAACAAGACTCAACCGTTGTAAATGCATTTCGATTATTGTCTGCTGAAAGTTCCCAGACAAATGAAGGTGATCCTTGTGCTCCAACTCCTTGGGAATGGGTGGATTGTAGTACCACCATAACACCAAGAATTACAAAAATAATTCTTTCAAGAAGGAATGTGAAAGGTGAAATCCCACCTGAGCTTAGCAACATGGAAGCATTGACAGAGTTGTGGTTAGATGGCAACCTGCTTACTGGATCATTACCTGACGTGAGCAAACTTATAAATCTAAAGATTGTGCATTTAGAGAACAACAAGTTGTCTGGTCGACTACCGTCTTACCTTGGTAGTTTGCCAAGCTTACAAGCACTGTTCATACAGAACAACTCATTTAGTGGGGAAATACCTGCTGGATTAATATCTGAAAAAATTGTTTTTATCTATGAAGGTAATCCTGGACTATACAGAGAGAGCAAGAAGCATTTTAAGATGGTAGTGGGAATTTCAATTGGAGTACTAGTGATCCTGTTAATATTTTTCTTGGTAAGCTTGGGGCTATTGCTTAATACGCGGAGAAAGGCATCTCAAAAGAAACGTGAGGAAGAAGTATGCATTTCTGGACGCACTAATAATAGTAAACCTTTAACTGGATACTCATTTCTTCGGGGTGGAAATTTAATGGATGAAAATACTACTTGCCATATCACACTCAGAGAGTTGAAAGAAGCTACAGACAATTTTTCAAAGAAAATTGGCAAAGGAAGCTTTGGATCTGTCTACTATGGGAAGATGAGAGATGGAAAAGAAATAGCAGTTAAGAGCATGAGTGAATCATCCTGTCATGGGAACCAGCAATTTGTTAATGAGGTGGCCCTCCTATCCAGAATTCATCACAGAAATTTGGTTCCCTTGATTGGATACTGTGAAGAAGAATGTCAGCATATTCTGGTTTACGAGTATATGCACAATGGCACTTTACGGGATCACATTCATGAGAGTTCCAAGAAGAAGAACTTAGACTGGTTAGCTCGTCTTCGTATTGCAGAAGATGCAGCTAAAGGTGTTGAATACTTACACACAGGATGCAATCCTAGCATCATTCACCGTGATATAAAGACAGGCAATATTCTCCTAGACATAAATATGAGAGCAAAAGTATCAGACTTTGGACTCTCTAGACTAGCAGAAGAAGATTTAACCCATGTATCAAGCATTGCACGAGGAACTGTGGGCTACTTGGATCCTGAATACTATGCAAGTCAGCAATTGACAGAAAAGAGTGACGTGTACAGTTTTGGAGTTGTTCTGTTGGAACTTATATCTGGAAGAAAACCTGTGTCATGTGAAGATTATGGTGCTGAAATGAACATTGTTCACTGGGCTAGATCTTTAACTCGGAAAGGAGATGCAATGAACATCATTTACCCTTCTCTCCATGGGAATGCTAAAACTGAGTCCATTTGGAGGGTGGTTGAAATTGCCATGCAATGTGTAGAACACCATGGTGCCTCAAGGCCAAGGATGCAAGAAATCATTTTGGCTATACAAGATGCTATCAAGATTGAAAAAGGAGCAGAAAATAAGCCAAAATCATCATCATCATCATCGTTTTCTGGTAGTGGCAGCTCAAAGCCACATTCTTCCCGCAAAACTTTACTCACAAGCTTTCTTGAAATTGAGAGCCCTGACCTGTCAAATGGTTGCCTCCCATCTGCAAGATAG 2814 0.4062 MGLPSLFLALIPLLTSFAVCQLEEFVSIDCGGSSNYTDNSTGLAWISDSGIMQHGISVEVESPKGNMVQYQKRRDFPTDSKKYCYTLSTEERRRYLVRATFQYGSLESGDTYPQFQLYLDATKWATVSIYDASRIYVKEMIIRAPSNSIDVCVCCATTGSPFISTLELRPLNLSMYATDFEDNFFLEVAARINFGAPTEDAVRYPDDPYDRIWDSDLIRRQNYLVGVAPGTERIGTTKNIYVETREYPPVKVMQTAVVGRKGVLSYRLNLEDFPANARAYAYFAEIEDLDKNESRKFKLKQPYIADYSNAVVNIAENANGSYTLYEPSYMNVTLEFVLSFSFVITPGSTRGPLLNALEISKYVEIASKTDKQDSTVVNAFRLLSAESSQTNEGDPCAPTPWEWVDCSTTITPRITKIILSRRNVKGEIPPELSNMEALTELWLDGNLLTGSLPDVSKLINLKIVHLENNKLSGRLPSYLGSLPSLQALFIQNNSFSGEIPAGLISEKIVFIYEGNPGLYRESKKHFKMVVGISIGVLVILLIFFLVSLGLLLNTRRKASQKKREEEVCISGRTNNSKPLTGYSFLRGGNLMDENTTCHITLRELKEATDNFSKKIGKGSFGSVYYGKMRDGKEIAVKSMSESSCHGNQQFVNEVALLSRIHHRNLVPLIGYCEEECQHILVYEYMHNGTLRDHIHESSKKKNLDWLARLRIAEDAAKGVEYLHTGCNPSIIHRDIKTGNILLDINMRAKVSDFGLSRLAEEDLTHVSSIARGTVGYLDPEYYASQQLTEKSDVYSFGVVLLELISGRKPVSCEDYGAEMNIVHWARSLTRKGDAMNIIYPSLHGNAKTESIWRVVEIAMQCVEHHGASRPRMQEIILAIQDAIKIEKGAENKPKSSSSSSFSGSGSSKPHSSRKTLLTSFLEIESPDLSNGCLPSAR 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00111 937 ProSitePatterns Protein kinases ATP-binding region signature. 615 637 IPR017441 GO:0005524
Spst3g00111 937 ProSiteProfiles Protein kinase domain profile. 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00111 937 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 409 499 - -
Spst3g00111 937 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 685 892 - -
Spst3g00111 937 SUPERFAMILY Protein kinase-like (PK-like) 596 876 IPR011009 -
Spst3g00111 937 MobiDBLite consensus disorder prediction 892 913 - -
Spst3g00111 937 Gene3D Phosphorylase Kinase; domain 1 588 684 - -
Spst3g00111 937 Gene3D Transferase(Phosphotransferase) domain 1 685 902 - -
Spst3g00111 937 CDD STKc_IRAK 615 876 - -
Spst3g00111 937 SMART serkin_6 609 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00111 937 Gene3D Ribonuclease Inhibitor 367 507 IPR032675 -
Spst3g00111 937 FunFam serine/threonine-protein kinase PBS1-like 587 684 - -
Spst3g00111 937 ProSitePatterns Serine/Threonine protein kinases active-site signature. 730 742 IPR008271 GO:0004672|GO:0006468
Spst3g00111 937 SUPERFAMILY L domain-like 397 503 - -
Spst3g00111 937 MobiDBLite consensus disorder prediction 888 913 - -
Spst3g00111 937 Pfam Protein tyrosine and serine/threonine kinase 611 876 IPR001245 GO:0004672|GO:0006468
Spst3g00111 937 Pfam Malectin-like domain 28 361 IPR024788 -
Spst3g00111 937 PANTHER OS07G0107800 PROTEIN-RELATED 455 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00111 Spst-Chr3 1986875 1994551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00111 1 937 Receptor kinase-like Gene Family AT1G67720 67.056 0.0 1253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Spst3g00111 Malectin_like 1.6e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00111 - - vum:124840153 1689.09