Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00016 ATGGCAAACAATGGGATGAATCCATCACTACTTCCTGCAATTCCATCTTCTTCTTCTTCTTCACTTGATACCTTACGAGCAAGTTTGCTAAATCAAACGGTTGGAACTTCACAGAATCAACTCATTCCTAATCAGGATCCTCACATTCCTAATCATGATGAATATATTCCTTCTCCTGATCACCCTATTCCTGCTCCTGCTCAACAAAATATTCCAGCAGTTCAAGATATTCCTGCTGCTACACCAGCCCTTCCTCGGGATGTTCCTAGTCTTACTCATGACCATAATCAAGATATTCCTGCTCCTGCACTTGATCAACATGCTACTACTTTTACTGATACTTCTCCCGCCAATCTTGATCCATTTCTCAATCAAGATGATTCTCTTTTGATTTCTTGTCTTGAATATAATATTCCAGCTTTGGTTACTTCTCTTGAGCATAATATTCCCACCCTGGTTTCTACACATGATCAAAATAACAACGATCCCATCGTTGAGAAACAAATTGAAGGGCCTAAGCATGAAGTTCATTCTGTTACTCCTACCCTAAATCAAGATATTCTACCTCCTGGTCAAGATATTTCGCCCCTTCGTCAGGATCATACGCCATCTCTTGATCTTGATCTTGATGCGATACTTAAAATTTTGAACTGCGATTTGGTATCCCAACCAACGACCAGCCAAAGTAAAGATACGGAAAACGCACGAATGTTGAAGATTGCGAATAATGCAATGGAAGAGTTGATGAAACTCTTAAGTATGAACGAACCCTTCTGGTTCAGGTCTCTAGTGGATGAGAGATTCATTCTTCAGCGTGATTGCTACCAAAGGATATTTCGTAGGAGTAATTACTTAAACGGACCTCATGCTCGAGTAGAGTCTTCGAAAGATTCACGAGTAGTAAAAATGAGTGGGACGGAGCTTGTGGAAATGTTTTTAAATTCGGACAAATGGGTTGATCTATTCCCAACAATTGTTAAAAGCGCCCAAACAATTGAAGTACTAGAAAGCGGTTCGTTAGGAAACCGAAATGGCGCTTTGCAGTTGATGAAAGCAGAAATGCACATTCTTTCACCTTTGGTTCCAATTCGGGAATTCCACTTCCTTCGTTATTGTAAACAAATTGAAGCAGGTGTATGGACCATAGGGGATGTGTCAATTGATTCTTCTACACACAAAACCTCTACTGTTTCTCGCGCTCGGAGGTTTCCATCTGGATTACTCATTCAAGAAATGACTGAGGGATTGTGCAGGGTTTCTTGGGTGGAGCACGTGGAAGTGGATGATAAGATCCAAACTCACCAGCTTTTCAGAGATCTTATTTGTGGCAGTAATGCATATGGAGCAGAAAGGTGGGTTTTGGCACTTGAAAGAATGTGTGAGAGGTTTGCAAGTGCCTCAGCTGATACCATACCCGGTTGTGAGGCTGGAGGAGTGATTAGGTCACCTGACTCAAGAAGGAATGTAATGCACCTGACTCGTCGTATGGTTAAGTCTTTTGGTGGAAGTTTGTGCATGCAAGATAACACAAACTTCCCACACCTAACCAGGATGAACAATGGTGGTATTAGGGTTGCCGTTAGAATGAACTTAACCGAGCCTGGTGAGCCTAAAGGCATGATTCTCAGTGCAGCTACCTCCTTTCGCCTTCCTCTCTCTCCACAAGATGTTTTTGACTACTTGATAGATGACAAGAAACGAGCTAAGTGGGATGTTCTATGCTCTGGAAATGCAGGGCACGAGATTCAACGCATCACTACTGGAAGTAATCCTGTAAACTGTGTTTCAATCATGCGTCCTTTCATCCCTAAAGAGAACAACCTAGTGATTCTCCAAGAAAGTTATGCAGATGCTTTGGGATCTATGTTGGTTTATGCTCCTTTTGATATGAGGGCATTAAGCTTCGTCATGAACGGAGAAGACACGTCACTGTTTCCGATTCTTCCATCTGGCTTCACCATATCTAGGGATGGCCAATCAGATGTTTCTGAAGAACAATCTGGTGGCTCAGGAGGTTCGTTGGTGACTCTAATGTTTCAAATTTTGGCCTCCAGCCCATCTAGAATGAGCATGGTAGACATTGAACTTGTTGCTAATGTTAATACTCTTGTGACCTCAACAGTAGAAAATATTAAAGGTGCTCTGAATTGTTCCGGTTCGCAGTAA 2166 0.4206 MANNGMNPSLLPAIPSSSSSSLDTLRASLLNQTVGTSQNQLIPNQDPHIPNHDEYIPSPDHPIPAPAQQNIPAVQDIPAATPALPRDVPSLTHDHNQDIPAPALDQHATTFTDTSPANLDPFLNQDDSLLISCLEYNIPALVTSLEHNIPTLVSTHDQNNNDPIVEKQIEGPKHEVHSVTPTLNQDILPPGQDISPLRQDHTPSLDLDLDAILKILNCDLVSQPTTSQSKDTENARMLKIANNAMEELMKLLSMNEPFWFRSLVDERFILQRDCYQRIFRRSNYLNGPHARVESSKDSRVVKMSGTELVEMFLNSDKWVDLFPTIVKSAQTIEVLESGSLGNRNGALQLMKAEMHILSPLVPIREFHFLRYCKQIEAGVWTIGDVSIDSSTHKTSTVSRARRFPSGLLIQEMTEGLCRVSWVEHVEVDDKIQTHQLFRDLICGSNAYGAERWVLALERMCERFASASADTIPGCEAGGVIRSPDSRRNVMHLTRRMVKSFGGSLCMQDNTNFPHLTRMNNGGIRVAVRMNLTEPGEPKGMILSAATSFRLPLSPQDVFDYLIDDKKRAKWDVLCSGNAGHEIQRITTGSNPVNCVSIMRPFIPKENNLVILQESYADALGSMLVYAPFDMRALSFVMNGEDTSLFPILPSGFTISRDGQSDVSEEQSGGSGGSLVTLMFQILASSPSRMSMVDIELVANVNTLVTSTVENIKGALNCSGSQ 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00016 721 MobiDBLite consensus disorder prediction 1 21 - -
Spst3g00016 721 CDD START_ArGLABRA2_like 235 461 - -
Spst3g00016 721 SUPERFAMILY Bet v1-like 517 702 - -
Spst3g00016 721 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 208 716 IPR042160 -
Spst3g00016 721 SUPERFAMILY Bet v1-like 232 464 - -
Spst3g00016 721 SMART START_1 239 462 IPR002913 GO:0008289
Spst3g00016 721 Gene3D - 239 440 IPR023393 -
Spst3g00016 721 ProSiteProfiles START domain profile. 230 465 IPR002913 GO:0008289
Spst3g00016 721 Pfam START domain 240 462 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00016 Spst-Chr3 521619 530583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00016 194 717 Homeobox Transcription Factor Family AT1G17920 43.258 1.61e-130 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00016 K09338 - gmx:100783586 827.394