Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst3g00006 ATGGCTGCACAGGAGCAGAAGATTTTTGCCTACGAAACCTTGGCTGCTGTCACCAAGAATTTTAGTGATATTCATAAGCTAGGTGAGGGAGGTTTTGGACCTGTCTACAAGGGGAAGCTGAATGATGGGAGAGAGATTGCTGTGAAGAAGTTATCACACACTTCAAATCAAGGGAAGAAGGAATTCATGAATGAAGCCAGGTTGTTGGCTCGTGTGCAGCATCGGAATGTGGTCAATTTAGTGGGCTATTGTGTCCATGGCAACGAAAAGCTACTTGTTTATGAGTATGTTGCTCATGAAAGCCTAGACAAGCTTCTTTTCAAATCACAAAAGAGAGAGAAGCTTGATTGGAAACGAAGGTTGGGCATAATCACAGGCGTGGCAAAGGGGTTACTTTATCTGCACGAAGACTCTCACAATTGCATCATCCATCGCGACATCAAGGCGAGTAACATCTTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCCCGTCTCTTCCCCGAAGATCAAAGCCAAGTCAATACACGTGTGGCTGGAACCAATGGATACATGGCTCCGGAATATGTTATGCATGGAAATCTATCAGTGAAGGCAGACGTATTTAGTTATGGAGTTTTGGTGTTGGAGTTGATCACCGGCCAAAGAAACTCTTCTTTTAATTTGGATGTGGACGCGCAGAATCTGCTTGATTGGGCATACAAGATGTACAAGAAAGGGAAGAGCTTAGAAATTGTGGACTCGACGTTAGCAGCTACGATGGTAGGTGAAGAGGTGGCCATGTGCATTCAGCTGGGTTTGTTATGCACACAAGGCGATCCACAGCTACGTCCCACAATGAGGCGTGTGGTGGTGATGCTGTCGAGGAAGCCAGGCCAGATGCAAGAACCAACAAGACCAGGAGTACCTGGTTCCAGATACAGAAGACCTCGGAGACACTCTGCATTGTCTTCCACAGTGGGTACTTCTGGTGCCTCTGATTCACACACTTCTGATTCAAGTAATAATTATACCACTGTTACCACCAGTGCCACAGGGACTAGCTCTGCTACTGTTGAAACAGACCCCAAAGGTAAACGTCCAATGCGGGAGGGTTAG 1110 0.4649 MAAQEQKIFAYETLAAVTKNFSDIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEARLLARVQHRNVVNLVGYCVHGNEKLLVYEYVAHESLDKLLFKSQKREKLDWKRRLGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITGQRNSSFNLDVDAQNLLDWAYKMYKKGKSLEIVDSTLAATMVGEEVAMCIQLGLLCTQGDPQLRPTMRRVVVMLSRKPGQMQEPTRPGVPGSRYRRPRRHSALSSTVGTSGASDSHTSDSSNNYTTVTTSATGTSSATVETDPKGKRPMREG 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst3g00006 369 CDD STKc_IRAK 27 293 - -
Spst3g00006 369 MobiDBLite consensus disorder prediction 292 369 - -
Spst3g00006 369 ProSiteProfiles Protein kinase domain profile. 21 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00006 369 FunFam Cysteine-rich receptor-like protein kinase 10 98 303 - -
Spst3g00006 369 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 346 - -
Spst3g00006 369 PIRSF TyrPK_CSF1-R 25 115 - -
Spst3g00006 369 PIRSF TyrPK_CSF1-R 98 361 - -
Spst3g00006 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Spst3g00006 369 Pfam Protein tyrosine and serine/threonine kinase 25 290 IPR001245 GO:0004672|GO:0006468
Spst3g00006 369 MobiDBLite consensus disorder prediction 319 358 - -
Spst3g00006 369 Gene3D Transferase(Phosphotransferase) domain 1 98 302 - -
Spst3g00006 369 FunFam Cysteine-rich receptor-like protein kinase 10 1 96 - -
Spst3g00006 369 SMART serkin_6 21 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst3g00006 369 SUPERFAMILY Protein kinase-like (PK-like) 6 305 IPR011009 -
Spst3g00006 369 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst3g00006 Spst-Chr3 221629 225205 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst3g00006 9 305 Receptor kinase-like Gene Family AT4G11530 52.508 1.35e-111 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst3g00006 PK_Tyr_Ser-Thr 2.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst3g00006 - - gmx:100795769 667.922