Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02972 ATGATGGCATTGCGCTCTCTCTTTAGAGTAATTGCATCACTTCTATTCCTCTCAACCTTTCTCAAATTTGCAGCATCTGCGTCTTCCAAATCCACACCCACCACCGGTTCCCTCAGAGACTACAAAAAGTTCATAAAAGATGAGTGCAATTCAACCACTTATCCAACACTTTGCTACAACTCTCTCTCCCCATATGCATCAAACATCAAAAGAAACCGCGTGACACTCACCAAACTCTCCATTCATGTGGCTCTAAAAGCAGCCAAGAGTGCAAACAGCACATTGACAAAGCTGTCCAAGGGGAAGCTAACGTATGGAGAAACGTCTGTCATTGGTGACTGTCGAGAGAACATGGAGGACACGTTGGATCTGCTTCAGCAATCTGCTGATGGGTTGGCACATTTGAATGGTACCTCTACTGCTGAAGAGAAGTTTCAATGGGATAACATAAAGACCTGGATGAGTGCTTCCATAACAGATGAGTCTACATGTACCGATGAGTTTGATGAAATACAAGTGCGTCCTTCACTGCAGAAGAAGATCAAAACCAGCATCAAAGAATCCTTATCGTGA 573 0.438 MMALRSLFRVIASLLFLSTFLKFAASASSKSTPTTGSLRDYKKFIKDECNSTTYPTLCYNSLSPYASNIKRNRVTLTKLSIHVALKAAKSANSTLTKLSKGKLTYGETSVIGDCRENMEDTLDLLQQSADGLAHLNGTSTAEEKFQWDNIKTWMSASITDESTCTDEFDEIQVRPSLQKKIKTSIKESLS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02972 190 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 190 IPR035513 -
Spst2g02972 190 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 182 - -
Spst2g02972 190 NCBIfam pectinesterase inhibitor domain 14 179 IPR006501 GO:0004857
Spst2g02972 190 Pfam Plant invertase/pectin methylesterase inhibitor 43 182 IPR006501 GO:0004857
Spst2g02972 190 SMART PMEI_2 40 189 IPR006501 GO:0004857
Spst2g02972 190 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 183 IPR035513 -
Spst2g02972 190 CDD PMEI-like_3 49 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02972 Spst-Chr2 29478362 29480358 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02972 2 172 Carbohydrate Esterase AT5G53370 22.807 1.50e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02972 - - gmx:100776299 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02972 2 29478362 29480358 Spst2g02972 2 29478362 29480358 ECH