Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02971 ATGGAAACCATTTCTTCTATACATCTTTTCACAACTCTTTTCATAATTCTTGCTTCTACTCTCACCACACAGTGTGCCAACAAAGTTAGTGAAACACCTTACCAAGAAGCAAGCACGGTGTTCATCAGAACATCTTGTAGCTCCACAAGTTATCCAAGACTCTGCTATAGCTCCTTAGTGAAGCATGCAGACTTGATCCAAACAAACCGTGTGCTTTTAACGGGCACGGCTCTTAATGTGACTCTTGCATCTGCCAAATCGACCTCAGCAGTGATGTCAGTGATGGCAAAGAGGCAGGGGCTGAAGCCGAGAGAGGTTGCAGCGATGAAGGACTGTGTGGAGGAGCTGAGTGACTCGGTGGATGAACTGAGAAGGTCTATCGATGAGATTAGTCACCTAAGAACCTCCAACTTTGAGATGACAATGAGTGACGTACAAACATGGGTAAGCGCTGCTTTGACAGATGTGAACACATGCACAGATGGGTTCCAAGAGAGTGCCATAACCATTGATGGTACAAGCACCAAGAGCAGTGTGAGAGGACTTGTTGTGCAGCTAGCTCAGTTGACCAGCAATGCCTTGGCTTTGATAAATCAGCTAGCCAATTCTCATGGTTAA 618 0.4579 METISSIHLFTTLFIILASTLTTQCANKVSETPYQEASTVFIRTSCSSTSYPRLCYSSLVKHADLIQTNRVLLTGTALNVTLASAKSTSAVMSVMAKRQGLKPREVAAMKDCVEELSDSVDELRRSIDEISHLRTSNFEMTMSDVQTWVSAALTDVNTCTDGFQESAITIDGTSTKSSVRGLVVQLAQLTSNALALINQLANSHG 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02971 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 13 196 - -
Spst2g02971 205 SMART PMEI_2 37 196 IPR006501 GO:0004857
Spst2g02971 205 Coils Coil 113 133 - -
Spst2g02971 205 NCBIfam pectinesterase inhibitor domain 10 200 IPR006501 GO:0004857
Spst2g02971 205 CDD PMEI-like_3 44 202 - -
Spst2g02971 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 200 IPR035513 -
Spst2g02971 205 FunFam Pectinesterase inhibitor 3 37 201 - -
Spst2g02971 205 Pfam Plant invertase/pectin methylesterase inhibitor 41 196 IPR006501 GO:0004857
Spst2g02971 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02971 Spst-Chr2 29475956 29476573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02971 15 200 Carbohydrate Esterase AT1G53830 31.915 5.85e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02971 - - vra:106755267 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02971 2 29475956 29476573 Spst2g02971 2 29475956 29476573 ECH