Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02951 ATGAAACCTTTTCTTCTCTTTCTCACATTCTCCTTCCTCTGCCAAACACACCTACTCCTAGTTCTCTCTGCCACAACCCTGCCTCTCCAACTCATCTCCCTCCTCTCAATAAAATCATCCCTCCTAGACCCTCTCAATAGCCTCCATGACTGGGACCCCTCCCGCACCTCCTCCAACTCCAATCCCCAAGACCCAATATGGTGTTCCTGGAGAGGCGTCACATGCCACTCCAAAACATCTCAAATCACCACCCTCGACCTCTCCCACCTCAATCTCTCCGGCACAATCTCACCCCAAATCCGCCACCTATCCACCTTAAACCACCTTAACCTCAGCGGAAATGACTTCAGCGGAAGTTTCCAATTCGCCATTTTCGAGCTAACGGAACTGAGAACTCTAGACATCAGCCACAACTCCTTCAACGCAACCTTCCCACCCGGTATATCAAAGCTCAAGTTCCTCAGGCACTTCAACGCCTACAGCAACAGCTTCACCGGGCCCCTCGTTCAAGAGTTAACCAGCCTTCGTTTTCTGGAACACCTGAACCTCGGCGGAAGCTACTTCAGCGACAGGATTCCACCAAGTTACGGCACTTTCCCGAGACTCAAGTTTCTAGAATTAGCCGGCAACGCCTTGGGAGGTCCACTTCCACCCCAATTAGGCCACTTGGCTGAACTGGAACACTTGGAAATTGGATACAACAATTTCACAGGAACACTACCCTTGGAACTGGCATTGCTCTCTAACCTCAAATACTTGGACATCTCAACCGCAAACATCACCGGGAACGTGATGCCGGAGCTGGGAAACCTCGTCAAGCTGGAGACACTTTTACTGTTCAGGAACAGGTTAACAGGAGAAATCCCACCAAGCATAGGAAGATTAAAGTCCCTGAAAATCCTTGACCTCTCGGATAACGAACTCACAGGGCCAATCCCCACACAAGTCACCATGCTAACAGAACTAACCACGCTCCACCTAATGCAAAACAACCTAACCGGAGAAATACCACAGGGAATCGGAGACCTACCGAAGCTAGAGACTCTGTTCCTCTTCAACAACTCACTCACCGGAACCCTCCCTCAACAACTGGGCTCCAACGGGTTACTACTGAAACTAGACGTTTCAACAAACTCAATCGAAGGTCCAATCCCTGAAAATGTCTGCAAAGGTAACAGGCTCTTGAAACTCATACTCTTTCTCAACAAGTTCAGTCATACTCTTCCACCATCCCTCGCCAACTGCACCTCACTCGCCAGGGTTCGCATCCAAAACAATTTCCTCAACGGTTCAATCCCGGAAGGCCTCACGCTCCTCCCTAACCTTACATTCCTAGATATCAGCAGTAACAACTTCCAGGGTCCAATTCCGGAAAGCTTAGGTAACTTGCAGTACTTCAACATCTCCGGAAACTCGTTCGGAACCTCCTTACCTGCATCTATTTGGAATGCAACTAATCTCGTAATCTTCTCCGCCGCTTCGTCGAACATCACTGGTCAAGTTCCAGATTTCATTGGGTGTCAGCAATTGTATAAGCTCGAATTGCAGGGAAATTCCATCAACGGTACGATTCCATGGGATATTGGACACTGCCAGAAGCTGATTTTACTGAATCTGAGTCGAAACTCACTCACCGGGATCATTCCCTGGGAAATCTCTACTCTCCCTTCCATCACCGACGTTGATCTCTCTCACAATTCCCTCACTGGAACCATTCCCTCAAACTTCAACAACTGCTCCACGCTCGAGAATTTCAACGTGAGTTTCAACTCCCTCACCGGTCCAATTCCATCGTCCGGCATCTTCCCGAACCTCCATCCTTCCTCCTACTTCGGCAACCAGGGCCTCTGCGGCGGCGTGTTGGTCAAGCCCTGCGCTGCGGACGCCCTCGCCGCGTCCGAAGACCAGGTCGACGTCCGCCGCCAGCAGCCGAAGCGAACCGCCGGTGCAATCGTGTGGATAGTAGCCGCCGCGTTCGGCATCGGACTCTTCGTGCTGGTGGCCGGGACGCGCTGCTTCCACGCGAACTACAACCGGCGGTTCGGCGAGGAGGTCGGGCCGTGGAAGTTAACGGCGTTCCAGCGGCTGAATTTCACGGCGGAGGACGTGCTGGAGTGCTTGTCGATGTCGGATAAGATATTAGGGATGGGATCGACTGGAACAGTTTACCGCGCCGAAATGGCAGGTGGCGAGATGATAGCCGTTAAGAAGCTGTGGGGAAAACAGAAGGAGAATATCCGACGGAGGAGAGGGGTTCTGGCTGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGGAATATCGTGAGGTTGTTAGGGTGCTGCAGCAACAGGGAGTGTACCATGCTTCTCTACGAGTACATGCCCAATGGCAACTTGGATGATTTGTTGCATGCCAAAAACAAAGGAGATAATCTCGTCGCCGATTGGTTCACCAGATACAAGATCGCCCTTGGCGTCGCTCAGGGAATCTGCTATCTTCACCACGACTGTCACCCCGTCATCGTCCACCGCGATCTCAAACCTAGCAACATTCTCTTGGACGCTGAGATGGAGGCCAGAGTCGCAGATTTTGGAGTCGCCAAGTTGATTCAGACCGACGAATCCATGTCCGTCATTGCCGGATCCTACGGCTACATTGCTCCAGAATATGCTTACACACTTCAAGTGGATGAGAAGAGTGACATTTACAGCTATGGGGTAGTGTTGATGGAGATCCTAAGCGGAAAACGTTCTGTGGATGCAGAATTTGGAGATGGGAACAGCATAGTGGATTGGGTGAGGTCAAAGATAAAGTCAAAAGATGGGATTGATGACATATTGGACAAGAATGCAGGGGCAGGGTGCACATCAGTGAGAGAAGAGATGATCCAGATGCTTAGAATTGCATTGCTTTGCACCAGCAGAAATCCTGCAGACAGGCCTTGTATGAGGGATGTTGTGTTGATGCTGCAAGAGGCCAAGCCAAAGAGGAAATTGCTTGATAGTGTTGTAGGCCAAGCCAATGTGGTTGCTGCTCCTGACATTCCTTTGCCTCAAAAGCCAACCGCAGACCAATGCTAA 3060 0.5095 MKPFLLFLTFSFLCQTHLLLVLSATTLPLQLISLLSIKSSLLDPLNSLHDWDPSRTSSNSNPQDPIWCSWRGVTCHSKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFSGSFQFAIFELTELRTLDISHNSFNATFPPGISKLKFLRHFNAYSNSFTGPLVQELTSLRFLEHLNLGGSYFSDRIPPSYGTFPRLKFLELAGNALGGPLPPQLGHLAELEHLEIGYNNFTGTLPLELALLSNLKYLDISTANITGNVMPELGNLVKLETLLLFRNRLTGEIPPSIGRLKSLKILDLSDNELTGPIPTQVTMLTELTTLHLMQNNLTGEIPQGIGDLPKLETLFLFNNSLTGTLPQQLGSNGLLLKLDVSTNSIEGPIPENVCKGNRLLKLILFLNKFSHTLPPSLANCTSLARVRIQNNFLNGSIPEGLTLLPNLTFLDISSNNFQGPIPESLGNLQYFNISGNSFGTSLPASIWNATNLVIFSAASSNITGQVPDFIGCQQLYKLELQGNSINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISTLPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLTGPIPSSGIFPNLHPSSYFGNQGLCGGVLVKPCAADALAASEDQVDVRRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNRRFGEEVGPWKLTAFQRLNFTAEDVLECLSMSDKILGMGSTGTVYRAEMAGGEMIAVKKLWGKQKENIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNRECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFTRYKIALGVAQGICYLHHDCHPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVRSKIKSKDGIDDILDKNAGAGCTSVREEMIQMLRIALLCTSRNPADRPCMRDVVLMLQEAKPKRKLLDSVVGQANVVAAPDIPLPQKPTADQC 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02951 1019 Gene3D Transferase(Phosphotransferase) domain 1 787 1001 - -
Spst2g02951 1019 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Spst2g02951 1019 Pfam Leucine Rich repeat 296 310 IPR001611 GO:0005515
Spst2g02951 1019 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 217 312 - -
Spst2g02951 1019 FunFam Leucine-rich repeat receptor-like kinase 30 160 - -
Spst2g02951 1019 Pfam Protein kinase domain 711 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02951 1019 ProSitePatterns Protein kinases ATP-binding region signature. 714 737 IPR017441 GO:0005524
Spst2g02951 1019 SUPERFAMILY Protein kinase-like (PK-like) 711 983 IPR011009 -
Spst2g02951 1019 SMART LRR_typ_2 319 342 IPR003591 -
Spst2g02951 1019 SMART LRR_typ_2 271 295 IPR003591 -
Spst2g02951 1019 SMART LRR_typ_2 555 578 IPR003591 -
Spst2g02951 1019 SMART LRR_typ_2 343 367 IPR003591 -
Spst2g02951 1019 SMART LRR_typ_2 127 151 IPR003591 -
Spst2g02951 1019 SMART LRR_typ_2 199 223 IPR003591 -
Spst2g02951 1019 SMART LRR_typ_2 460 484 IPR003591 -
Spst2g02951 1019 Pfam Leucine Rich Repeat 441 463 IPR001611 GO:0005515
Spst2g02951 1019 ProSiteProfiles Protein kinase domain profile. 708 993 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02951 1019 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 677 786 - -
Spst2g02951 1019 SMART serkin_6 708 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02951 1019 Pfam Leucine rich repeat N-terminal domain 30 75 IPR013210 -
Spst2g02951 1019 FunFam Leucine-rich repeat receptor-like protein kinase TDR 316 627 - -
Spst2g02951 1019 Pfam Leucine rich repeat 509 568 IPR001611 GO:0005515
Spst2g02951 1019 SUPERFAMILY L domain-like 313 617 - -
Spst2g02951 1019 Gene3D Ribonuclease Inhibitor 506 626 IPR032675 -
Spst2g02951 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 834 846 IPR008271 GO:0004672|GO:0006468
Spst2g02951 1019 Gene3D Ribonuclease Inhibitor 462 505 IPR032675 -
Spst2g02951 1019 Gene3D Ribonuclease Inhibitor 390 461 IPR032675 -
Spst2g02951 1019 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 247 985 - -
Spst2g02951 1019 Gene3D Phosphorylase Kinase; domain 1 689 786 - -
Spst2g02951 1019 SUPERFAMILY RNI-like 85 405 - -
Spst2g02951 1019 Gene3D Ribonuclease Inhibitor 286 389 IPR032675 -
Spst2g02951 1019 Gene3D Ribonuclease Inhibitor 193 285 IPR032675 -
Spst2g02951 1019 FunFam leucine-rich repeat receptor-like protein kinase TDR 787 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02951 Spst-Chr2 29277051 29280730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02951 6 998 Receptor kinase-like Gene Family AT1G08590 42.549 0.0 762
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g02951 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02951 - - gmx:100809695 1849.71