Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02949 ATGAAACGAGGAAGAGAAGAAAGCATGGAGGAATCCAGTTCTAGGGTTTCTCCCACTCTTCACCACTCCACAGCAGGCATCATCAAGCGACTTCGCCTCGAGAACTTCATGTGTCACTCCAAACTCGAGACTGAGTTCGGAAAACACGTCAATTTCATTACGGGCCAAAACGGAAGTGGTAAGAGTGCAATCCTAACTGCACTGTGTGTTGCATTTGGCTGTCGGGCCAAAGGAACTCAGAGAGCATCCAGTATGAAGGATTTCATCAAAACTGGTGCCAGTAATGCTGTCATCCAAGTTGAAATTCAAAATGAAGGAGAGGATGCTTTCAAGCCTGAAATATATGGTCATGTTATCATTGTAGAACGTAGGATATCTGAATCCACAAGTTCTACTACATTAAAAGATCACAAAGGAAGGAAAGTTGTCAGTCGAAAAGCAGATCTTCTAGAAATCGTTGAACATTTTAATATTGATGTGGAGAATCCATGTGTAATTATGACTCAAGACAAAAGCAGGGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAATGATCTTCTGGAAAGCATTTCCAATGAAATTACTTATGCATATGATATAGTTAAGGATTTAGAGGCTGCAATAAAGCCCATTGAGAATGAGCTTAATGAGTTGCAAGTTAAAATTAGAAACATGGAACATGTTGAACAAATATCCATACAGGTTCAGCGGTTAAAAAAGAAACTTGCATGGTCATGGGTTTATGATGTGGACAAGCAACTAGAGGAACAAAATGTAAAGATTGAAAAGTTGAAGAACCGGATACCTACCTGCCAGGCTAAGATTGATCAACAACTGCATTTGGTTGAAAAGTTGAAGGAAAGCTGCTCCAAGAAGAGAGATGAAATTGCAAGAATGTTGGAGAAGACATCACAAGTTAAGCAAATGAAGGAAAATTTAAACCAATCCGTGTCCATGGCAAAGAAAGAGGCATTTGAACTTGAGCGAGACTGCAAATGCAAAACTAGCAACATACAGAAGATGGTACAGCAACTTAAAATGCTTGAACAACAAGTACGGGATATTCGTGAGCAGCATGAAAAAAATACTCAGGCTGAAGAATGTAATGCGGAGGAAAAACTGAAGGTGCTCAAAGATGAGGTTCATGCAGCTGAGCTAAAGCTGAAGAGATTGAAAGAAGAAGATGCTTCATTAATGGAAAGCATACGTAGGCAAAATGATGAAATCCGAAAGATAGCTGATAAGATTCATGATCATGAAAAAAATCGCCATGCTATCATGTGTCGAATTCGTGATCTTCAACAACATGAAAGCAATAAGATTACTGTTTTTGGAGGATCGAAAGTAATCCATTTGTTACAAATAATTGAGAGATACCACCAAAAGTTTAAGATGCCTCCAATTGGTCCAATTGGTGCCCATCTGAAGCTTCTTCATGGTAATAAATGGGCTCTTGCCCTTGAATATGCTATTGGAAGATTGCTGAATTCTTTTATAGTGACAAATCATGCGGATTTTCGTCTTCTGAAACAATGTGCCAAGGAAGCAAACTATGGTCACCTTCAAATTATTATTTATGATTTTTCAATACCAAGATTGGCTATACCACAGCATATGCTTCCTGATACAGAACATCCATCAATTATTTCTGTCTTACAATGCGAGAACCATACTGTGATTAATGTCTTAGTGGATCAGGGACATGTTGAGAGACAAGTGTTAGTCAAGGATTACGAAGTCGGGAAAGTGGTTGCCTTTGAGCGAAAGATCCAAAATTTGAAGGAGGTCTATGCAGCAAATGGATGTAGAATGTTTTCTCGAGGTCCAGTGCAGACTGTTCTTCAACCAAATAAGAGGCAAAGAACTGGTCGTCTTTGTGGTTCTTTTGAAGATGAGATTGAAAAACTTAAAGTTGAAGCATCTGATGAACAAAAGGTTGCTGATGACTGTAAAAAGAATAAAAGAGTGGCAGAAGTCAAGCTTGAGGAGCTTGACAAAAATATAAGTTCTATAAAGAGACAATGTGTAAATGCAGGTAAAAGTTATACTTCTAAGAAGCTAGCTTTGGAGGAAGAAATGCATTTGCACACTGCTGAAAATAGTGCAACACCATTGTCCTCTGTTGATGAGTTCGTCGAAGAAATTTCAGAGATCCAGAAAAAAATAGGAGAAGAACAAGTCTTACTGGATGGCCTTCAGCAAAAAGGGCTTGAAGCAGCAGGAAGAGCAGATGATCTTAAAGTGAAATTTGACAAACTGTGTGAATCAGCGAATGGTGAAATTGCTGCCCTGGAGAAAGCTGAGAGTGAACTTGTAGAAATTGAAAAAGAAATGGGTTCAGCAAAAAAGGCAAAGGATCATTATGAGGGTGTCATGAAAAACAAGGTCCTAATTGATATTAAGGAGGCAGAGGAACACTATCAGGAGCTTACAAAGAAACGCAAGGAAAGTGTTGAAAAGGCTTCTATAATTTGCTCTCAGAATGAGCTTGAAACGTTAGGAGGTTGTGATGGGAATACCCCAGAGCAAATCAGTGCTCAATTAGAAAGACTGAATCAGACACTTAGGCGTGAGAGTCAACGGTACTCTGAATCAATCGATGATCTTAGGATGCTGTATAAGAAAAAAGAGCGGAAGATTATTAAAAGGCAGCAAGTTTACAAAACCCTTCGACAGAAATTGGATGCTTGCCAGAGAGCCTTAGAGTTACGAAAGAGAAAGTTTCAGAGAAATGCAACTTATCTGAAGCATCAGCTTTCTTGGAAATTTAATGGTCATTTGAGAAAGAAAGGGATTAGTGGACTTATCAAAGTTAATTATGAACAGAAAACCTTAATGATTGAGGTACAAATGCCACAAGATGCATCAAACAAAGCTGTTCGAGATACTAGGGGGCTTTCAGGTGGGGAGCGTTCTTTTTCAACATTGTGCTTTGCGTTGGCGCTTCATGAAATGACAGAGGCCCCTTTTAGAGCAATGGATGAATTTGATGTCTTCATGGATGCAGTAAGCCGAAAAATCAGCTTGGACACTCTAGTTGATTTTGCTGAGGCACATGGATCACAGTGGATATTCATCACTCCGCATGATACTAGCATGGTGAGGACGGGGGACAGGATTAAGAAGATGCAAATGGCTGCTCCACGTTCTTGA 3195 0.3925 MKRGREESMEESSSRVSPTLHHSTAGIIKRLRLENFMCHSKLETEFGKHVNFITGQNGSGKSAILTALCVAFGCRAKGTQRASSMKDFIKTGASNAVIQVEIQNEGEDAFKPEIYGHVIIVERRISESTSSTTLKDHKGRKVVSRKADLLEIVEHFNIDVENPCVIMTQDKSREFLHSGNNKDKFKFFYKATLLQQVNDLLESISNEITYAYDIVKDLEAAIKPIENELNELQVKIRNMEHVEQISIQVQRLKKKLAWSWVYDVDKQLEEQNVKIEKLKNRIPTCQAKIDQQLHLVEKLKESCSKKRDEIARMLEKTSQVKQMKENLNQSVSMAKKEAFELERDCKCKTSNIQKMVQQLKMLEQQVRDIREQHEKNTQAEECNAEEKLKVLKDEVHAAELKLKRLKEEDASLMESIRRQNDEIRKIADKIHDHEKNRHAIMCRIRDLQQHESNKITVFGGSKVIHLLQIIERYHQKFKMPPIGPIGAHLKLLHGNKWALALEYAIGRLLNSFIVTNHADFRLLKQCAKEANYGHLQIIIYDFSIPRLAIPQHMLPDTEHPSIISVLQCENHTVINVLVDQGHVERQVLVKDYEVGKVVAFERKIQNLKEVYAANGCRMFSRGPVQTVLQPNKRQRTGRLCGSFEDEIEKLKVEASDEQKVADDCKKNKRVAEVKLEELDKNISSIKRQCVNAGKSYTSKKLALEEEMHLHTAENSATPLSSVDEFVEEISEIQKKIGEEQVLLDGLQQKGLEAAGRADDLKVKFDKLCESANGEIAALEKAESELVEIEKEMGSAKKAKDHYEGVMKNKVLIDIKEAEEHYQELTKKRKESVEKASIICSQNELETLGGCDGNTPEQISAQLERLNQTLRRESQRYSESIDDLRMLYKKKERKIIKRQQVYKTLRQKLDACQRALELRKRKFQRNATYLKHQLSWKFNGHLRKKGISGLIKVNYEQKTLMIEVQMPQDASNKAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFAEAHGSQWIFITPHDTSMVRTGDRIKKMQMAAPRS 1064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02949 1064 Coils Coil 388 436 - -
Spst2g02949 1064 Gene3D - 821 1063 IPR027417 -
Spst2g02949 1064 Coils Coil 729 749 - -
Spst2g02949 1064 Coils Coil 261 288 - -
Spst2g02949 1064 Pfam RecF/RecN/SMC N terminal domain 28 1059 IPR003395 -
Spst2g02949 1064 Gene3D - 27 232 IPR027417 -
Spst2g02949 1064 Coils Coil 324 379 - -
Spst2g02949 1064 Coils Coil 771 798 - -
Spst2g02949 1064 Coils Coil 807 834 - -
Spst2g02949 1064 Coils Coil 647 688 - -
Spst2g02949 1064 MobiDBLite consensus disorder prediction 1 21 - -
Spst2g02949 1064 Coils Coil 296 316 - -
Spst2g02949 1064 Coils Coil 215 242 - -
Spst2g02949 1064 Coils Coil 859 882 - -
Spst2g02949 1064 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 8 1063 - -
Spst2g02949 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 1057 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02949 Spst-Chr2 29247824 29275088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02949 9 1064 Structural Maintenance of Chromosomes family AT5G61460 58.412 0.0 1201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02949 K22804 - gmx:100816916 1772.29