Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst2g02945 | ATGACGTATAAAAAATTCTTGATTAAACAGAAACAGGTGAACAACCCGATTGAGTTTCTGAGCTTTACAATCAACATGAACAACCATACATTTTATGTCTGTCTTACAATTTTGGTGTTTTTGCTGGTTCTTTGTCGAGCCACTAATGGGCTAACTCAGGCTGAGGCTCTCATCAAGTGGAAACAAAGTCTACCTGATCAACCCATTCTGGACTCATGGGTGATCAACTCCACTGCAACAACTCAGACTCCATGTTCGTGGCGAGGTATCACTTGTGATTCCCAAGGCAGTGTCGCTATTATAAACTTGGCTCAAACTGGACTTGCAGGTACCCTTCGGAACTTCAACTTTTCTGTTTTTCCTAACCTTCTTCGTCTTGATCTCAAAGTAAACAACCTCACTGGCCCCATTCCACAAAATATTGGGGTGCTCTCAAACCTCCAATTCCTTGACCTTTCCACCAATCATCTCAATGGCACTCTCCCTCTCTCTCTTGCCAATCTGACTCAAGTTTATGAGTTTGATGTTTCAAGAACTCACATAGCAGGGATATTAGACCCTCGCTTATTTCCTGATGGATCTGACAACCCCAAAAGTGGTCTCATTGGTATCAGGAATTTTCTCTCCCAGGACACCCTGCTAGGTGGCAGAATCCCAAATGAAATAGGGAACATAAGAAACTTAACTATTCTAGCTATCGAGGGAAACAAATTTTATGGGCCTATTCCTCCATCTTTAGGCAACTGCACACATTTAAGCATTGTCAGATTGTCTGAGAACCTACTCACTGGCACAATACCTCCAAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCCTTTTCACTAACAACTTAAATGGTACAGTACCACAAGAATTTGGAAATTTATCCTCCTTGATTGTGCTGCATCTTGCTGAGAATAACTTCGTCGGTCAATTGCCACAAGTGTGCAAAAGTGGCAAACTTGCAAGGTTTGGTGCAGCTTACAACAGTTTCACTGGCCCAATTCCTAGAAGCCTTAGAAACTGCTCAGCATTGTTCAGAGTTCGACTTGAATACAATCGTCTGACAGGCTTTGCAGATCAAGATTTTGGAGTGTATCCTAACCTCACTTACATGGACTTCAGCTATAACAAGGTGGTAGGTCACCTTTCTGCAAATTGGGGTGCCTGCAAGAGCATGCGATCACTCAAAATGGCAGGGAATGCACTCAGTGGCAACATTCCAGGTGAGATTTTTCAGTTGAACCAGCTAGAAGAGCTTGACCTATCCTCCAACCAAATATCAGGAGAGATTCCTCCACAGATAGGAAATTCAGCCAAGTTGTATGAATTAAATTTGAGTCACAACAAACTCTCTGGTAAGATACCATCAGAAATTGGAAAGCTTTCCAACTTGCGGTCCTTAGACCTCTCTATGAACATGCTGTTGGGTTCAATCCCAAATCAGATAGGGGACATTTCCAACTTGCAGAATTTAAATCTGAGCAACAATAAGTTAACCGGCACAATCCCCTACCAAATTGGAAACCTTGCAGCTTTACAATATTTTCTGGACTGGAGTTACAATTCACTTTCAGGAAATATTCCTGCTGATCTCGGGAAGCTCTCAAATTTGATAAGCTTGAATATCTCTCACAACAATCTGTCAGGTTCCATCCCTCACTCCATCAGTGAAATGTTGAGTTTGTCAGCCCTCAATCTCTCCTACAATAATTTGGCGGGTCCTGCTCCTGAAGGTGGAATATTCAACTCTTCTTATCCCCTGGATTTGAGCAACAACAAAGATTTATGCGGGCGTGTTCGAGGCTTACAACCTTGTAATGTCTTTCTCAGTCAACCTGTTGGTGAATCTAGTGAGAAAAACAAGGTTGTGATCCTTGTAGCTTCCTTGGGAGGCGGTCTTCTTATTTCTTTGGTATTAGTTGGGATTTGTTTCTTGTGCCATAAGAGAAAGGCAAGAGCTCCAAGTCAAAAAATTTCAGTCGGAGGAACAAATCCATTTTCAATTTGTTACTTTGACGGCAGAGTTGTGTATGCAGACATAATAGAAGCCACCAATAACTTTGATAGCCAGTATTGCATTGGGGAAGGAGCACTGGGAAAAGTTTATAAAGCGGAGATGCAAGGAGGTCAAGTATTTGCTGTAAAAAGGTTGAAGTGTGATGCAGACAACTTAGATGTTGAGAGTATAAAATCATTTCAGAATGAGGTAAAAGCCATGACAGAAACACGCCACCGAAACATTGTCAAGCTTTATGGATTTTGCTCCCAAGGGATGCACACTTTTTTAATTTATGAGTATATGGATAGAGGGAACTTAGCTGACCTGCTGAAACGTGAAAATGGTGCAGTGGAACTAGATTGGCATAAGAGGGTTGATATCATCAAAGCTGTAGCAAGCGCTTTGTCCTATATGCACCATGATTGCACTCCCCCTTTAATTCACAGAGACATATCAAGCAAGAATGTTTTACTGTCCTCCAATCTTTCTGCCCATATCTCAGATTTTGGAACTGCAAGGTTTCTAAAACCTGACTCACCTATCCGGACATCATTTGCTGGCACATACGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTGGAGGTTCTTATGGGAAAGCACCCCAGTGACCTTGTTTCCGTCTTACAAACTTGGAGTGAAGAAAAAGAAAACTCTGAAAAGATTTCACTAGACCCTCGTCTCTCACCTCCTCCAAATAACCGTATTTTGAAGGAATTGAATTTGATTGCGAACATTGCTCTTTCATGCATACAAGTAAACCCTCAATCTCGACCAACCATGCAAAACATAGTTCAGCAGCTTAGGCTGTAG | 2886 | 0.42 | MTYKKFLIKQKQVNNPIEFLSFTINMNNHTFYVCLTILVFLLVLCRATNGLTQAEALIKWKQSLPDQPILDSWVINSTATTQTPCSWRGITCDSQGSVAIINLAQTGLAGTLRNFNFSVFPNLLRLDLKVNNLTGPIPQNIGVLSNLQFLDLSTNHLNGTLPLSLANLTQVYEFDVSRTHIAGILDPRLFPDGSDNPKSGLIGIRNFLSQDTLLGGRIPNEIGNIRNLTILAIEGNKFYGPIPPSLGNCTHLSIVRLSENLLTGTIPPSIGKLTNLTDVRLFTNNLNGTVPQEFGNLSSLIVLHLAENNFVGQLPQVCKSGKLARFGAAYNSFTGPIPRSLRNCSALFRVRLEYNRLTGFADQDFGVYPNLTYMDFSYNKVVGHLSANWGACKSMRSLKMAGNALSGNIPGEIFQLNQLEELDLSSNQISGEIPPQIGNSAKLYELNLSHNKLSGKIPSEIGKLSNLRSLDLSMNMLLGSIPNQIGDISNLQNLNLSNNKLTGTIPYQIGNLAALQYFLDWSYNSLSGNIPADLGKLSNLISLNISHNNLSGSIPHSISEMLSLSALNLSYNNLAGPAPEGGIFNSSYPLDLSNNKDLCGRVRGLQPCNVFLSQPVGESSEKNKVVILVASLGGGLLISLVLVGICFLCHKRKARAPSQKISVGGTNPFSICYFDGRVVYADIIEATNNFDSQYCIGEGALGKVYKAEMQGGQVFAVKRLKCDADNLDVESIKSFQNEVKAMTETRHRNIVKLYGFCSQGMHTFLIYEYMDRGNLADLLKRENGAVELDWHKRVDIIKAVASALSYMHHDCTPPLIHRDISSKNVLLSSNLSAHISDFGTARFLKPDSPIRTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLALEVLMGKHPSDLVSVLQTWSEEKENSEKISLDPRLSPPPNNRILKELNLIANIALSCIQVNPQSRPTMQNIVQQLRL | 961 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst2g02945 | 961 | Gene3D | Ribonuclease Inhibitor | 51 | 198 | IPR032675 | - | |
Spst2g02945 | 961 | Pfam | Protein kinase domain | 695 | 958 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g02945 | 961 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 295 | 610 | - | - | |
Spst2g02945 | 961 | FunFam | Leucine-rich repeat receptor protein kinase MSP1 | 653 | 769 | - | - | |
Spst2g02945 | 961 | ProSiteProfiles | Protein kinase domain profile. | 690 | 961 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g02945 | 961 | PRINTS | Leucine-rich repeat signature | 147 | 160 | - | - | |
Spst2g02945 | 961 | PRINTS | Leucine-rich repeat signature | 416 | 429 | - | - | |
Spst2g02945 | 961 | Pfam | Leucine rich repeat N-terminal domain | 52 | 93 | IPR013210 | - | |
Spst2g02945 | 961 | SUPERFAMILY | L domain-like | 74 | 409 | - | - | |
Spst2g02945 | 961 | SMART | serkin_6 | 690 | 961 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Spst2g02945 | 961 | SUPERFAMILY | RNI-like | 331 | 585 | - | - | |
Spst2g02945 | 961 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 815 | 827 | IPR008266 | GO:0004672|GO:0006468 | |
Spst2g02945 | 961 | SMART | LRR_typ_2 | 416 | 440 | IPR003591 | - | |
Spst2g02945 | 961 | SMART | LRR_typ_2 | 144 | 168 | IPR003591 | - | |
Spst2g02945 | 961 | SMART | LRR_typ_2 | 464 | 487 | IPR003591 | - | |
Spst2g02945 | 961 | SMART | LRR_typ_2 | 488 | 512 | IPR003591 | - | |
Spst2g02945 | 961 | SMART | LRR_typ_2 | 297 | 320 | IPR003591 | - | |
Spst2g02945 | 961 | SMART | LRR_typ_2 | 537 | 561 | IPR003591 | - | |
Spst2g02945 | 961 | ProSiteProfiles | Leucine-rich repeat profile. | 418 | 440 | IPR001611 | GO:0005515 | |
Spst2g02945 | 961 | Pfam | Leucine Rich Repeat | 442 | 464 | IPR001611 | GO:0005515 | |
Spst2g02945 | 961 | Pfam | Leucine Rich Repeat | 539 | 559 | IPR001611 | GO:0005515 | |
Spst2g02945 | 961 | FunFam | Nuclear pore complex protein NUP107 | 51 | 190 | - | - | |
Spst2g02945 | 961 | FunFam | MDIS1-interacting receptor like kinase 2 | 770 | 961 | - | - | |
Spst2g02945 | 961 | SUPERFAMILY | Protein kinase-like (PK-like) | 673 | 959 | IPR011009 | - | |
Spst2g02945 | 961 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 200 | 290 | - | - | |
Spst2g02945 | 961 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 209 | 959 | - | - | |
Spst2g02945 | 961 | Gene3D | Ribonuclease Inhibitor | 199 | 324 | IPR032675 | - | |
Spst2g02945 | 961 | Gene3D | Transferase(Phosphotransferase) domain 1 | 770 | 961 | - | - | |
Spst2g02945 | 961 | Gene3D | Ribonuclease Inhibitor | 325 | 611 | IPR032675 | - | |
Spst2g02945 | 961 | Gene3D | Phosphorylase Kinase; domain 1 | 666 | 769 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst2g02945 | Spst-Chr2 | 29202335 | 29205373 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Spst2g02945 | 33 | 863 | Receptor kinase-like Gene Family | AT4G08850 | 38.943 | 0.0 | 603 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Spst2g02945 | Pkinase | 4.9e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst2g02945 | - | - | aprc:113866080 | 1441.4 |