Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02945 ATGACGTATAAAAAATTCTTGATTAAACAGAAACAGGTGAACAACCCGATTGAGTTTCTGAGCTTTACAATCAACATGAACAACCATACATTTTATGTCTGTCTTACAATTTTGGTGTTTTTGCTGGTTCTTTGTCGAGCCACTAATGGGCTAACTCAGGCTGAGGCTCTCATCAAGTGGAAACAAAGTCTACCTGATCAACCCATTCTGGACTCATGGGTGATCAACTCCACTGCAACAACTCAGACTCCATGTTCGTGGCGAGGTATCACTTGTGATTCCCAAGGCAGTGTCGCTATTATAAACTTGGCTCAAACTGGACTTGCAGGTACCCTTCGGAACTTCAACTTTTCTGTTTTTCCTAACCTTCTTCGTCTTGATCTCAAAGTAAACAACCTCACTGGCCCCATTCCACAAAATATTGGGGTGCTCTCAAACCTCCAATTCCTTGACCTTTCCACCAATCATCTCAATGGCACTCTCCCTCTCTCTCTTGCCAATCTGACTCAAGTTTATGAGTTTGATGTTTCAAGAACTCACATAGCAGGGATATTAGACCCTCGCTTATTTCCTGATGGATCTGACAACCCCAAAAGTGGTCTCATTGGTATCAGGAATTTTCTCTCCCAGGACACCCTGCTAGGTGGCAGAATCCCAAATGAAATAGGGAACATAAGAAACTTAACTATTCTAGCTATCGAGGGAAACAAATTTTATGGGCCTATTCCTCCATCTTTAGGCAACTGCACACATTTAAGCATTGTCAGATTGTCTGAGAACCTACTCACTGGCACAATACCTCCAAGTATTGGTAAATTAACCAATCTAACCGATGTGCGCCTTTTCACTAACAACTTAAATGGTACAGTACCACAAGAATTTGGAAATTTATCCTCCTTGATTGTGCTGCATCTTGCTGAGAATAACTTCGTCGGTCAATTGCCACAAGTGTGCAAAAGTGGCAAACTTGCAAGGTTTGGTGCAGCTTACAACAGTTTCACTGGCCCAATTCCTAGAAGCCTTAGAAACTGCTCAGCATTGTTCAGAGTTCGACTTGAATACAATCGTCTGACAGGCTTTGCAGATCAAGATTTTGGAGTGTATCCTAACCTCACTTACATGGACTTCAGCTATAACAAGGTGGTAGGTCACCTTTCTGCAAATTGGGGTGCCTGCAAGAGCATGCGATCACTCAAAATGGCAGGGAATGCACTCAGTGGCAACATTCCAGGTGAGATTTTTCAGTTGAACCAGCTAGAAGAGCTTGACCTATCCTCCAACCAAATATCAGGAGAGATTCCTCCACAGATAGGAAATTCAGCCAAGTTGTATGAATTAAATTTGAGTCACAACAAACTCTCTGGTAAGATACCATCAGAAATTGGAAAGCTTTCCAACTTGCGGTCCTTAGACCTCTCTATGAACATGCTGTTGGGTTCAATCCCAAATCAGATAGGGGACATTTCCAACTTGCAGAATTTAAATCTGAGCAACAATAAGTTAACCGGCACAATCCCCTACCAAATTGGAAACCTTGCAGCTTTACAATATTTTCTGGACTGGAGTTACAATTCACTTTCAGGAAATATTCCTGCTGATCTCGGGAAGCTCTCAAATTTGATAAGCTTGAATATCTCTCACAACAATCTGTCAGGTTCCATCCCTCACTCCATCAGTGAAATGTTGAGTTTGTCAGCCCTCAATCTCTCCTACAATAATTTGGCGGGTCCTGCTCCTGAAGGTGGAATATTCAACTCTTCTTATCCCCTGGATTTGAGCAACAACAAAGATTTATGCGGGCGTGTTCGAGGCTTACAACCTTGTAATGTCTTTCTCAGTCAACCTGTTGGTGAATCTAGTGAGAAAAACAAGGTTGTGATCCTTGTAGCTTCCTTGGGAGGCGGTCTTCTTATTTCTTTGGTATTAGTTGGGATTTGTTTCTTGTGCCATAAGAGAAAGGCAAGAGCTCCAAGTCAAAAAATTTCAGTCGGAGGAACAAATCCATTTTCAATTTGTTACTTTGACGGCAGAGTTGTGTATGCAGACATAATAGAAGCCACCAATAACTTTGATAGCCAGTATTGCATTGGGGAAGGAGCACTGGGAAAAGTTTATAAAGCGGAGATGCAAGGAGGTCAAGTATTTGCTGTAAAAAGGTTGAAGTGTGATGCAGACAACTTAGATGTTGAGAGTATAAAATCATTTCAGAATGAGGTAAAAGCCATGACAGAAACACGCCACCGAAACATTGTCAAGCTTTATGGATTTTGCTCCCAAGGGATGCACACTTTTTTAATTTATGAGTATATGGATAGAGGGAACTTAGCTGACCTGCTGAAACGTGAAAATGGTGCAGTGGAACTAGATTGGCATAAGAGGGTTGATATCATCAAAGCTGTAGCAAGCGCTTTGTCCTATATGCACCATGATTGCACTCCCCCTTTAATTCACAGAGACATATCAAGCAAGAATGTTTTACTGTCCTCCAATCTTTCTGCCCATATCTCAGATTTTGGAACTGCAAGGTTTCTAAAACCTGACTCACCTATCCGGACATCATTTGCTGGCACATACGGCTATGCTGCTCCAGAGCTTGCTTACACAATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGCGTTTTGGCTTTGGAGGTTCTTATGGGAAAGCACCCCAGTGACCTTGTTTCCGTCTTACAAACTTGGAGTGAAGAAAAAGAAAACTCTGAAAAGATTTCACTAGACCCTCGTCTCTCACCTCCTCCAAATAACCGTATTTTGAAGGAATTGAATTTGATTGCGAACATTGCTCTTTCATGCATACAAGTAAACCCTCAATCTCGACCAACCATGCAAAACATAGTTCAGCAGCTTAGGCTGTAG 2886 0.42 MTYKKFLIKQKQVNNPIEFLSFTINMNNHTFYVCLTILVFLLVLCRATNGLTQAEALIKWKQSLPDQPILDSWVINSTATTQTPCSWRGITCDSQGSVAIINLAQTGLAGTLRNFNFSVFPNLLRLDLKVNNLTGPIPQNIGVLSNLQFLDLSTNHLNGTLPLSLANLTQVYEFDVSRTHIAGILDPRLFPDGSDNPKSGLIGIRNFLSQDTLLGGRIPNEIGNIRNLTILAIEGNKFYGPIPPSLGNCTHLSIVRLSENLLTGTIPPSIGKLTNLTDVRLFTNNLNGTVPQEFGNLSSLIVLHLAENNFVGQLPQVCKSGKLARFGAAYNSFTGPIPRSLRNCSALFRVRLEYNRLTGFADQDFGVYPNLTYMDFSYNKVVGHLSANWGACKSMRSLKMAGNALSGNIPGEIFQLNQLEELDLSSNQISGEIPPQIGNSAKLYELNLSHNKLSGKIPSEIGKLSNLRSLDLSMNMLLGSIPNQIGDISNLQNLNLSNNKLTGTIPYQIGNLAALQYFLDWSYNSLSGNIPADLGKLSNLISLNISHNNLSGSIPHSISEMLSLSALNLSYNNLAGPAPEGGIFNSSYPLDLSNNKDLCGRVRGLQPCNVFLSQPVGESSEKNKVVILVASLGGGLLISLVLVGICFLCHKRKARAPSQKISVGGTNPFSICYFDGRVVYADIIEATNNFDSQYCIGEGALGKVYKAEMQGGQVFAVKRLKCDADNLDVESIKSFQNEVKAMTETRHRNIVKLYGFCSQGMHTFLIYEYMDRGNLADLLKRENGAVELDWHKRVDIIKAVASALSYMHHDCTPPLIHRDISSKNVLLSSNLSAHISDFGTARFLKPDSPIRTSFAGTYGYAAPELAYTMAVTEKCDVFSFGVLALEVLMGKHPSDLVSVLQTWSEEKENSEKISLDPRLSPPPNNRILKELNLIANIALSCIQVNPQSRPTMQNIVQQLRL 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02945 961 Gene3D Ribonuclease Inhibitor 51 198 IPR032675 -
Spst2g02945 961 Pfam Protein kinase domain 695 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02945 961 FunFam Leucine-rich repeat receptor-like protein kinase TDR 295 610 - -
Spst2g02945 961 FunFam Leucine-rich repeat receptor protein kinase MSP1 653 769 - -
Spst2g02945 961 ProSiteProfiles Protein kinase domain profile. 690 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02945 961 PRINTS Leucine-rich repeat signature 147 160 - -
Spst2g02945 961 PRINTS Leucine-rich repeat signature 416 429 - -
Spst2g02945 961 Pfam Leucine rich repeat N-terminal domain 52 93 IPR013210 -
Spst2g02945 961 SUPERFAMILY L domain-like 74 409 - -
Spst2g02945 961 SMART serkin_6 690 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02945 961 SUPERFAMILY RNI-like 331 585 - -
Spst2g02945 961 ProSitePatterns Tyrosine protein kinases specific active-site signature. 815 827 IPR008266 GO:0004672|GO:0006468
Spst2g02945 961 SMART LRR_typ_2 416 440 IPR003591 -
Spst2g02945 961 SMART LRR_typ_2 144 168 IPR003591 -
Spst2g02945 961 SMART LRR_typ_2 464 487 IPR003591 -
Spst2g02945 961 SMART LRR_typ_2 488 512 IPR003591 -
Spst2g02945 961 SMART LRR_typ_2 297 320 IPR003591 -
Spst2g02945 961 SMART LRR_typ_2 537 561 IPR003591 -
Spst2g02945 961 ProSiteProfiles Leucine-rich repeat profile. 418 440 IPR001611 GO:0005515
Spst2g02945 961 Pfam Leucine Rich Repeat 442 464 IPR001611 GO:0005515
Spst2g02945 961 Pfam Leucine Rich Repeat 539 559 IPR001611 GO:0005515
Spst2g02945 961 FunFam Nuclear pore complex protein NUP107 51 190 - -
Spst2g02945 961 FunFam MDIS1-interacting receptor like kinase 2 770 961 - -
Spst2g02945 961 SUPERFAMILY Protein kinase-like (PK-like) 673 959 IPR011009 -
Spst2g02945 961 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 200 290 - -
Spst2g02945 961 PANTHER LEUCINE RICH REPEAT KINASE 2 209 959 - -
Spst2g02945 961 Gene3D Ribonuclease Inhibitor 199 324 IPR032675 -
Spst2g02945 961 Gene3D Transferase(Phosphotransferase) domain 1 770 961 - -
Spst2g02945 961 Gene3D Ribonuclease Inhibitor 325 611 IPR032675 -
Spst2g02945 961 Gene3D Phosphorylase Kinase; domain 1 666 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02945 Spst-Chr2 29202335 29205373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02945 33 863 Receptor kinase-like Gene Family AT4G08850 38.943 0.0 603
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g02945 Pkinase 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02945 - - aprc:113866080 1441.4