Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02944 ATGGCAGTGACTGAGAAATGTGATGTGTTCAGCTTTGGTGTTTTGGCTTTGGAAGTTCTTACAGGAAAGCACCCCAGTGACCTTGTTTCCTACATACAAAGTTGTAGAGAACAAAAGCTAAACATGAAAGAGATTTTAGACCCTCGTCTCTTGCCTCCTTCCAAGAAGCATATTTTGAAGCCAGTGGAATTGATTGCCAACTTGGCTCTTTCATGCTTAAAGACAAACCCTCAATCTCGACCAAGTATGCGAAGCATAGCTCAGCTGCTTGAAATGGAGACTGCAGACATCATATAA 297 0.4209 MAVTEKCDVFSFGVLALEVLTGKHPSDLVSYIQSCREQKLNMKEILDPRLLPPSKKHILKPVELIANLALSCLKTNPQSRPSMRSIAQLLEMETADII 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02944 98 Pfam Protein tyrosine and serine/threonine kinase 3 90 IPR001245 GO:0004672|GO:0006468
Spst2g02944 98 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Spst2g02944 98 PANTHER LEUCINE RICH REPEAT KINASE 2 1 93 - -
Spst2g02944 98 ProSiteProfiles Protein kinase domain profile. 1 95 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst2g02944 98 SUPERFAMILY Protein kinase-like (PK-like) 3 92 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02944 Spst-Chr2 29171002 29171298 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02944 4 90 Receptor kinase-like Gene Family AT1G25320 37.895 2.22e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Spst2g02944 PK_Tyr_Ser-Thr 1.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02944 - - var:108339503 166.392