Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst2g02926 ATGGGCAAAGCAAGTAGTGCTTCTCTCCTTCTATCCTTTCTCACTCTTTCACTCTTTGTGGCAGAAACCTATGCAAATAGGCAAGTTCAAGCTCTTAACAAACTGCACAAGTCCAAGTTTTTCACAGGAAATTCACAAACTGATAGGAGTGAGTTTGAGGTAGAGGAGGTTGTTCTTGATGGCATTGTTCATTCTCAAGAGGGTCTCAAAGAGAAAGATAGAATTCAAGGGCTTCCAGGACAACCCCAAGTGGGTTTTTCTCAGTATGGAGGGTATGTCACTGTGGATAAACTTGCTGGTCGTGCCTTCTATTACTACTTTGTTGAAGCTGAACGTTCTCAACATACACTCCCTCTTCTTCTTTGGCTCAATGGAGGCCCTGGATGTTCATCTCTTGCATATGGAGCAATGCAAGAACTTGGACCATTTAGGGTAAACAGTGATGGCAAAACACTACACATGAACATGTTTTCATGGAACAAAGTTGCCAACGTTTTGTTCCTTGAGTCACCTGCTGGAGTAGGGTTTTCATATTCAAACAAATCAACAGATTATTCTTCCAGTGGAGATAAGAAAACAGCTGCAGATAATTATTTGTTCTTGGTGAATTGGTTGGAGAGATTTCCTGAGTATAAAAACAGAGATTTTTTTATTGCTGGAGAGAGCTACGCTGGGCATTATGTGCCTCAACTTGCACATACCATTCTCCATCATAACAAAAAAGCAAATAAAGCAATCATCAGCCTCAAAGGAATCTTGATTGGGAATGCAGTGATCAACGATGTCACTGACTCGGAAGGACTGTATGATTATCTCGCTAGCCATGCAATCATCTCTGACAGAGCAGCTTATGTGAACAAAGCTTGTGATTTCTCATCAAAGATTCAGAAAAGTGAGTGCGATGCAGCAGCAGAAGAAGTTGGGAATAATATTGCTTATATTGACTTATACAATATTTATGCTCCACTGTGCAAGAGTACCAAACTCACACCCCTGCCCAAACCATATTCTGTTGTGACTGATCCATGTAGTGAATCTTACGTGTATGCATATATGAATAGAAAAGATGTTCAAGAGGCTCTGCATGCCAATGTCACCCATCTTAAATTTGACTGGGAACCCTGCAGCGATGTCGTCAAGTGGGTACAAAGTGCTTCAACAGTCCTTCCACTTTTACATGAATTCCTCAACAATAGCCTCAGGGTTTGGATTTTCAGTGGTGACATAGATGGAAGGGTGCCTATTACTTCAACCAAGTATTCGGTTAAGAAGATGGAGCTCCCCGTTAAAACTGTTTGGCACCCTTGGTTTTCCCATGGGGAGGTGGGTGGCTATTCAGAAGTATACAAGGGAGGCCTAACATTAGCTACGGTGAGAGAAGCAGGGCATCAAGTGCCAAGTTACCAACCCGCAAGGGCGCTAACTTTGATCAAATATTTCTTAGACGGCACTCCTCTTCCTGGTCCTCCCAAAAGAAAAGCCTAG 1485 0.4242 MGKASSASLLLSFLTLSLFVAETYANRQVQALNKLHKSKFFTGNSQTDRSEFEVEEVVLDGIVHSQEGLKEKDRIQGLPGQPQVGFSQYGGYVTVDKLAGRAFYYYFVEAERSQHTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHMNMFSWNKVANVLFLESPAGVGFSYSNKSTDYSSSGDKKTAADNYLFLVNWLERFPEYKNRDFFIAGESYAGHYVPQLAHTILHHNKKANKAIISLKGILIGNAVINDVTDSEGLYDYLASHAIISDRAAYVNKACDFSSKIQKSECDAAAEEVGNNIAYIDLYNIYAPLCKSTKLTPLPKPYSVVTDPCSESYVYAYMNRKDVQEALHANVTHLKFDWEPCSDVVKWVQSASTVLPLLHEFLNNSLRVWIFSGDIDGRVPITSTKYSVKKMELPVKTVWHPWFSHGEVGGYSEVYKGGLTLATVREAGHQVPSYQPARALTLIKYFLDGTPLPGPPKRKA 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst2g02926 494 Gene3D alpha/beta hydrolase 69 326 IPR029058 -
Spst2g02926 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 470 IPR001563 GO:0004185|GO:0006508
Spst2g02926 494 FunFam Carboxypeptidase 69 326 - -
Spst2g02926 494 SUPERFAMILY alpha/beta-Hydrolases 67 488 IPR029058 -
Spst2g02926 494 Pfam Serine carboxypeptidase 80 482 IPR001563 GO:0004185|GO:0006508
Spst2g02926 494 Gene3D - 388 483 - -
Spst2g02926 494 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Spst2g02926 494 Gene3D - 343 379 - -
Spst2g02926 494 FunFam Carboxypeptidase 388 483 - -
Spst2g02926 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Spst2g02926 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Spst2g02926 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Spst2g02926 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst2g02926 Spst-Chr2 29007830 29012132 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst2g02926 351 486 Calmodulin-binding Proteins AT2G22960 26.471 3.86e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst2g02926 K16297 - gmx:100804815 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst2g02926 2 29007830 29012132 Spst2g02926 2 29007830 29012132 ECH